DRSC/TRiP Functional Genomics Resources

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Protein Alignment trr and SUVH1

DIOPT Version :10

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_196113.1 Gene:SUVH1 / 830376 AraportID:AT5G04940 Length:670 Species:Arabidopsis thaliana


Alignment Length:624 Identity:123/624 - (19%)
Similarity:190/624 - (30%) Gaps:208/624 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1916 LNFDVDKWVHLNCALWSNGVYETVSGALMNFQTALQAGLSQACSACHQPGATIK---------CF 1971
            :||:..    :|.|...||..|.|...||.|. ||:...:|...|.......||         |.
plant   139 MNFESG----INVADRENGNRELVLSVLMRFD-ALRRRFAQLEDAKEAVSGIIKRPDLKSGSTCM 198

  Fly  1972 KS--RCNSLYH---LPCAIREECVFYKNKSVHCSVHGHAHAGITMGAGAGATTGAGLGGSVA--- 2028
            ..  |.|:...   :|.....:..|::.:.....:|..:.|||......|.|....:..|:.   
plant   199 GRGVRTNTKKRPGIVPGVEIGDVFFFRFEMCLVGLHSPSMAGIDYLVVKGETEEEPIATSIVSSG 263

  Fly  2029 --DNELSS--LVVHRRVFVDRDENRQVATVMHYSELSNLLRVGNMTFLNVGQLLPHQLEAFHTPH 2089
              ||:..:  ::::.....:.|:::|.:.  ...|..||....::...:..:::....||.|...
plant   264 YYDNDEGNPDVLIYTGQGGNADKDKQSSD--QKLERGNLALEKSLRRDSAVRVIRGLKEASHNAK 326

  Fly  2090 -YIYPIGYKVSR-------------YYWCVRRPNRRCRYICSIAEAGCKPEFRIQVQDAGDKEPE 2140
             |||...|::..             .|..||.|             |..|.|             
plant   327 IYIYDGLYEIKESWVEKGKSGHNTFKYKLVRAP-------------GQPPAF------------- 365

  Fly  2141 REFRGSSPSAVWQQILQPITRLRKVHKWLQLFPQHISGEDLFGLTEPAIVRILESLPGI---ETL 2202
                     |.|..|          .||....|..      .||..|.:...:||:|..   |..
plant   366 ---------ASWTAI----------QKWKTGVPSR------QGLILPDMTSGVESIPVSLVNEVD 405

  Fly  2203 TD---------YRFKYGRNPLL----------------------------EFPLAINPSGAARTE 2230
            ||         ...||..:..|                            :||...|        
plant   406 TDNGPAYFTYSTTVKYSESFKLMQPSFGCDCANLCKPGNLDCHCIRKNGGDFPYTGN-------- 462

  Fly  2231 PKQRQLLVWRKPHTQRTAGSCSTQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWRNNVYL 2295
                .:||.|||.....:.||......|.....|          |..:...:|...:.|      
plant   463 ----GILVSRKPMIYECSPSCPCSTCKNKVTQMG----------VKVRLEVFKTANRGW------ 507

  Fly  2296 ARSKIQGLGLYAARDIEKHTMIIEYIGEVIRTEVSEIRE----KQYESKNRGIY-MFR------- 2348
                    ||.:...|...:.|..|:||.  .:.|::::    ..|......:| .|:       
plant   508 --------GLRSWDAIRAGSFICIYVGEA--KDKSKVQQTMANDDYTFDTTNVYNPFKWNYEPGL 562

  Fly  2349 LDEDR--------------VVDATLSGGLARYINHSCNPNCVTEIVEVDRD----VRIIIFAKRK 2395
            .|||.              ::.|...|.:||::||||:||...:.|..:.:    |.:..||...
plant   563 ADEDACEEMSEESEIPLPLIISAKNVGNVARFMNHSCSPNVFWQPVSYENNSQLFVHVAFFAISH 627

  Fly  2396 IYRGEELSYDYKFDIEDESH-------KIPCACGAPNCR 2427
            |....||:|||.......:.       |..|.||:..||
plant   628 IPPMTELTYDYGVSRPSGTQNGNPLYGKRKCFCGSAYCR 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
PRK13914 <623..>851 CDD:237555
ePHD2_KMT2C_like 1898..2002 CDD:277136 22/99 (22%)
FYRN 2067..2118 CDD:461787 11/64 (17%)
FYRC 2126..2215 CDD:197781 18/100 (18%)
SET_KMT2C_2D 2278..2430 CDD:380948 42/187 (22%)
SUVH1NP_196113.1 SRA 207..361 CDD:197742 27/168 (16%)
SET_AtSUVH-like 409..640 CDD:380943 52/268 (19%)
Blue background indicates that the domain is not in the aligned region.

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