DRSC/TRiP Functional Genomics Resources

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Protein Alignment trr and ASHH4

DIOPT Version :10

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_001319802.1 Gene:ASHH4 / 825166 AraportID:AT3G59960 Length:329 Species:Arabidopsis thaliana


Alignment Length:185 Identity:65/185 - (35%)
Similarity:95/185 - (51%) Gaps:32/185 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  2250 SCSTQRMANSAAIAGEVACPYSKQFVHSKSSQ--YKKMKQEWRNNVYLARSKIQGLGLYAARDIE 2312
            |||:             :|..|.:..:....|  .||||        |.:::..|.|:.|..||.
plant    89 SCSS-------------SCKCSSECTNKPFQQRHIKKMK--------LVQTEKCGYGIVADEDIN 132

  Fly  2313 KHTMIIEYIGEVIRTEVSEIREKQYESK-NRGIYMFRLDEDRVVDATLSGGLARYINHSCNPNCV 2376
            ....||||:||||..::.|.|..:...| ....|:.:::.:.|:|||..|..:|||||||:||..
plant   133 SGEFIIEYVGEVIDDKICEERLWKLNHKVETNFYLCQINWNMVIDATHKGNKSRYINHSCSPNTE 197

  Fly  2377 TEIVEVDRDVRIIIFAKRKIYRGEELSYDYKFDIE---DESHKIPCACGAPNCRK 2428
            .:...:|.:.||.|||.|.|.:||:|:|||:| ::   |:.    |.|||..|||
plant   198 MQKWIIDGETRIGIFATRFINKGEQLTYDYQF-VQFGADQD----CYCGAVCCRK 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
PRK13914 <623..>851 CDD:237555
ePHD2_KMT2C_like 1898..2002 CDD:277136
FYRN 2067..2118 CDD:461787
FYRC 2126..2215 CDD:197781
SET_KMT2C_2D 2278..2430 CDD:380948 60/157 (38%)
ASHH4NP_001319802.1 AWS 61..110 CDD:197795 6/33 (18%)
SET_ASHR3-like 112..250 CDD:380952 58/149 (39%)
Blue background indicates that the domain is not in the aligned region.

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