DRSC/TRiP Functional Genomics Resources

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Protein Alignment trr and AT3G08020

DIOPT Version :10

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_187459.2 Gene:AT3G08020 / 819993 AraportID:AT3G08020 Length:779 Species:Arabidopsis thaliana


Alignment Length:475 Identity:94/475 - (19%)
Similarity:162/475 - (34%) Gaps:137/475 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 YQRSGQQAKAQVKAAS------EPQDVETA-DGVW---DARDQQIIVCNFGSGTEMGAIKAEDAD 137
            |.:.....|.|.|.|:      :.:|::.| ..:|   |..|:::|          .:::|. |.
plant   323 YMQFQVDGKLQYKCATCRGECYQVKDLQDAVQELWKKKDVVDKELI----------ASLRAA-AG 376

  Fly   138 KQSEYRIST----PRNSQSNPLLHRNTAFT---------SFTKKEGA-SSSASSSSSTASVISIE 188
            ..:|..|.:    ..:.::.|:..|:..|:         ..:|:.|. |||...:|...|...:|
plant   377 LPTEEEIFSIFPFSDDEENGPVSGRSLKFSIKGLVEKSPKKSKEYGKHSSSKKHASKKGSHTKLE 441

  Fly   189 PSGSGQDHAENSGKSEDLDYVLMPASG------ADSSTSVGNSTGTGTP---------------- 231
            |    :.|.|...:...|..|.:...|      :|.::||.....|..|                
plant   442 P----EVHQEIGSERRRLGGVRIDNVGFQINEQSDVNSSVAGICSTHEPKIVKHKRVDDVMVTDE 502

  Fly   232 -------------------------AGTPIGATTSTIILNANNGTAGVSGAGTTTILTQKSGHTN 271
                                     ||.........:::|.......|||:..:.:::    |.:
plant   503 EKPSRIVRIKCSKPHDSDSEDTLRNAGEEKSVKAKKLVINLGARKINVSGSSKSNVVS----HLS 563

  Fly   272 YNIFNTTATGSQTPTTTLLNRVNLHPKM-KTQLMVNAKKLSEVTQ-TTAKVSIGN----KTISVP 330
            .:...:|..|.:...|..:..:.:..:. |||...:......||| ..|..|.||    ||...|
plant   564 RDKDQSTLGGDKVDQTGEVRTLKISGRFGKTQSEGSKATFGSVTQFPAASTSEGNHVDDKTSISP 628

  Fly   331 LL----KPLMS------ASGAATAGGATIVESKQLLQPGGQVT--------TVMSAAQQSGGQQV 377
            .|    :||:.      .||..|:...|..|.::|....||.:        ..|::.::.|....
plant   629 ALQKEARPLLKFKLRKPNSGDQTSSVTTQSEDEKLSSAKGQRSKRKRPSSLVDMASLKEDGEATT 693

  Fly   378 HPHVHS-------HAHHNFTKLIK---------RGPKNS---GTIVSFSGLQIKPANTKIVATKV 423
            |.|..:       .|:....||.|         .|.:||   ||:...||    ..:|..|:...
plant   694 HSHQDNSRNDEMMDANWILKKLGKDSIGKRVEVHGSQNSWRKGTVTDVSG----DTSTLSVSLDD 754

  Fly   424 VSKKMLQLQQHQQQIQQQQQ 443
            .|.|..:|.:|..:...|:|
plant   755 GSIKTFELGKHSVRFIPQKQ 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513 29/184 (16%)
PRK13914 <623..>851 CDD:237555
ePHD2_KMT2C_like 1898..2002 CDD:277136
FYRN 2067..2118 CDD:461787
FYRC 2126..2215 CDD:197781
SET_KMT2C_2D 2278..2430 CDD:380948
AT3G08020NP_187459.2 RING-H2 148..201 CDD:438112
PHD_SF 203..245 CDD:473978
PHD_SF 285..339 CDD:473978 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.

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