DRSC/TRiP Functional Genomics Resources

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Protein Alignment trr and ASHH3

DIOPT Version :10

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_566010.1 Gene:ASHH3 / 819021 AraportID:AT2G44150 Length:363 Species:Arabidopsis thaliana


Alignment Length:62 Identity:14/62 - (22%)
Similarity:23/62 - (37%) Gaps:18/62 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 PSSDPRRSSQTNSPHLTSRFRNRLGSWIAGMKGGNGD---------DEVTTSLTPSQLEIAE 150
            ||..|:      :.::......|.|.::   ..|:||         ..||..|.|:.:|..|
plant    62 PSCKPQ------TANILKLLNGREGKFV---DLGSGDGRLVDLSQYKNVTVFLAPNAMETLE 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
PRK13914 <623..>851 CDD:237555
ePHD2_KMT2C_like 1898..2002 CDD:277136
FYRN 2067..2118 CDD:461787
FYRC 2126..2215 CDD:197781
SET_KMT2C_2D 2278..2430 CDD:380948
ASHH3NP_566010.1 SET_ASHR3-like 117..255 CDD:380952
Tudor_Agenet_AtEML-like 313..362 CDD:410475
Blue background indicates that the domain is not in the aligned region.

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