DRSC/TRiP Functional Genomics Resources

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Protein Alignment trr and Setmar

DIOPT Version :10

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_848478.2 Gene:Setmar / 74729 MGIID:1921979 Length:309 Species:Mus musculus


Alignment Length:327 Identity:75/327 - (22%)
Similarity:115/327 - (35%) Gaps:108/327 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  2148 PSAVWQQILQPITRLRKVHKWLQLFPQHISGEDLFGLTEPAIVRILESLPGIETLTDYRFKYGRN 2212
            |.::|....:|..      |..|..|.|::|                  ||.:.           
Mouse    37 PVSLWPLGAEPRP------KPFQYTPDHVAG------------------PGADI----------- 66

  Fly  2213 PLLEFPLAINPSGAARTEPKQRQLLVWRKPHTQRTAGSCSTQRMANSAAIAGEVACPYSKQF-VH 2276
                .|..|...|.|..|             |....|:||..|..|:          |.... :.
Mouse    67 ----DPTQITFPGCACIE-------------TPCVPGTCSCLRHENN----------YDDNLCLR 104

  Fly  2277 SKSSQYKKMKQEWRNNVYL-----ARSKI----------------QGLGLYAARDIEKHTMIIEY 2320
            ...|:.|..|..:..||..     .|:::                :|.||.....|.|...:.||
Mouse   105 DVGSEGKYAKPVFECNVLCQCGMRCRNRVVQNGLHFLLQVFQTEKKGWGLRTLEFIPKGRFVCEY 169

  Fly  2321 IGEVIRTEVSEIREK-QYESKNRGIYMFRLDE--------DRVVDATLSGGLARYINHSCNPNCV 2376
            .|||:  ..||::.: ..::.:...|:..:.|        :..||.|..|.:.|::||||.||.:
Mouse   170 AGEVL--GFSEVQRRIHLQTSHDSNYIIAVREHIYSGQIMETFVDPTYIGNIGRFLNHSCEPNLL 232

  Fly  2377 TEIVEVDRDV-RIIIFAKRKIYRGEELSYDY------------KFDIEDESHKIPCACGAPNCRK 2428
            ...|.:|..| ::.:||.:.|..||||||||            |..|:....:.||.|||.:|..
Mouse   233 MIPVRIDSMVPKLALFAAKDILPGEELSYDYSGRFLNQVSSKDKEKIDCSPPRKPCYCGAQSCTT 297

  Fly  2429 WM 2430
            ::
Mouse   298 FL 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
PRK13914 <623..>851 CDD:237555
ePHD2_KMT2C_like 1898..2002 CDD:277136
FYRN 2067..2118 CDD:461787
FYRC 2126..2215 CDD:197781 10/66 (15%)
SET_KMT2C_2D 2278..2430 CDD:380948 53/194 (27%)
SetmarNP_848478.2 SET_SETMAR 50..304 CDD:380942 72/308 (23%)
Blue background indicates that the domain is not in the aligned region.

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