DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trr and setd1ba

DIOPT Version :9

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_001038599.2 Gene:setd1ba / 567970 ZFINID:ZDB-GENE-050309-289 Length:1844 Species:Danio rerio


Alignment Length:2234 Identity:422/2234 - (18%)
Similarity:684/2234 - (30%) Gaps:794/2234 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   488 HSEDDAPAPR---------KITAYSENLQKILNKSKSQESTGGPEEFTNINSVVIKPLDKNTLNC 543
            :.|.|.|.|:         ::........|:.:..:....|...::|.:|..|.|....||..:.
Zfish   115 YKETDLPVPKFKIDECYVGRVPPKEVTFAKLNDNVREGFLTDMCKKFGDIEEVEILYNPKNKKHL 179

  Fly   544 PPSFNIFK---------QQQHSQAAQSQSI---------------SAVGSGAGTPVTFTMASGNA 584
            ..:..:|:         |..|:.:.....|               ..:.:|:.||:|..:....|
Zfish   180 GIAKVVFETVKAAKDAVQNLHNTSVMGNIIHVELDPKGENRQRYFQRLINGSYTPLTLPVGGEEA 244

  Fly   585 SDLATTSTVSVSAGTICINSPMMGTRPIISIQNKNISLVLSKTTMAQQKPKMITTTTLSSQAALQ 649
            .|::..|                                |::..||.:..:.:.           
Zfish   245 CDVSPRS--------------------------------LAEALMACEPSRRLF----------- 266

  Fly   650 MHHALIQDSSADKAGSSANSGSATSGASMQLKLTTA------NTPTKLSVSLAPDVVKLEEVGSE 708
                        :.|||..:|:..||.:..:.|.||      :||........|     ...|:.
Zfish   267 ------------EGGSSVVAGTTPSGTNTPMSLDTAYSSLRQDTPQSQGTPHTP-----RPSGTP 314

  Fly   709 SKAKLLVKQEAVVKDSTGTPTSE-ERAEEIG-----------------TPEKRLNANATMTAINQ 755
                  ..|::......|||..: .|||..|                 .||:|.....|... |.
Zfish   315 ------FSQDSSYSSRQGTPAFQANRAESSGGYKSRRHETKFQDAYNRRPERRYVHGPTQRG-NT 372

  Fly   756 VQNQSANQIQMATSTSTASNPSTPNPTVNATPMNNQRSAAEDNALLKQLLQNNSSSHSLNQISIT 820
            .|..|..|.|.....|.|...:.|.||          ||            |..:::|..|..|.
Zfish   373 EQPPSFKQHQPPEPPSPAFTHTPPPPT----------SA------------NFKTAYSQYQPPIP 415

  Fly   821 SAHVGSASASAPLSARKVINVRAPSMGKVRSLEDQLARPVIPPVPTATQAAGSSSSSGSVATSTT 885
            ..:. .||...|:  ::.::.|.|              |..||.|                    
Zfish   416 QEYT-VASYHQPV--QRELDYRRP--------------PQAPPPP-------------------- 443

  Fly   886 TTTVASGGSSQQVATASATALPVSAVAITTPGVGGEAKLEQKSDQPAAIMQNQSQNQAPPPPPPP 950
                            |...|||.....|.|                          .|.|||.|
Zfish   444 ----------------STDFLPVRDRPTTPP--------------------------IPEPPPAP 466

  Fly   951 QQQQQQQLHQPQQLQPSPHQVKQTVQIVSKETSFISGPVAAKTLVTEATSKPAELLPPPPYEMAT 1015
            :.|.........:..|||.|..:...:.|:....:      |..:.|.....||:      .|..
Zfish   467 ETQPTTPPSSTPEPCPSPTQESERNSLDSRIEMLL------KPFLNERGDSDAEV------RMDG 519

  Fly  1016 APISNVTISISTKQAAPKELQMKPKAVAMS------LPMEQGDESLPEQAEPPLHSEQG--ATAA 1072
            :|||:   |.|.....|.:...:|.:..:.      ||..:.||        |:.....  |.:.
Zfish   520 SPISS---SSSQLSPIPPQRPSRPSSTGLEDISPTPLPDSEDDE--------PIRGTASLLANSR 573

  Fly  1073 GVAPHSGGPLVSAQWTNNHLEGGVATTKIPFKPGEPQKRKLPMHPQLDEKQIQQQA---EIPIS- 1133
            |::|           ||.|.:..|         |||:       ..:|:.....|:   ::.|| 
Zfish   574 GMSP-----------TNMHSKSCV---------GEPR-------TAIDKMDTGHQSSGEDMEISD 611

  Fly  1134 TSLPTTPTGQGTPDKVQLISAIATYVKKSGVPNEAQPIQNQSQGQVQMQAQMQATMQGHLSGQMS 1198
            ..:|.||...|..||..::::..:.::...:|....|                            
Zfish   612 DEMPGTPIASGDCDKNIVVNSALSLIQTIPMPPPGFP---------------------------- 648

  Fly  1199 GQISGHAAGQIPAQMHLQVQHQL-------HMAVHPQQQQQQLHQNQPQNATIPLPVTGQGAVPI 1256
              ...|||| .|...|....|..       |..:||......:|.         |||....::| 
Zfish   649 --PLPHAAG-FPLPPHHLPHHSTVSHLPSHHPMLHPLHSYGMMHF---------LPVDLLSSLP- 700

  Fly  1257 PVPTMESKAGDQRKRRKREVQKPRRTNLNAGQAGGALKDLTGPLPAGAMVQLAGMPPGTQYIQGA 1321
            .:..|..:...|...|..:.|.|......|..|..|.....||.|..::|             .|
Zfish   701 QLLQMPFQMQTQMLSRMAQSQHPYAYPYPAPSANPAAMPFGGPYPPLSVV-------------SA 752

  Fly  1322 ASGTGHVITSTGQGVTLGGVGASTGASSSPMLKKRVRKFSKVEEDHDAFTE-KLLTHIRQMQPLQ 1385
            .:.|.|     ||...|..:.....|...|..:      .:.|:.|.|..: .|:..:::::  .
Zfish   753 PADTLH-----GQPWPLPSMPQFNPAVPPPGYE------PQKEDPHKATIDGVLMAIVKELK--A 804

  Fly  1386 VLEPHLNRNFHFLIGSNETSGGGSPASMSSAASAGSSSAGGGKLKGGSRGWP---LSRHL----- 1442
            :::..|||....::...:.........:|:.|:......|.||.:...|..|   :|.||     
Zfish   805 IMKKDLNRKMVEVVAFRKFDEWWDKQELSAKATLTPVKTGEGKDEEKERAKPKETMSSHLPWNKG 869

  Fly  1443 EGLEDCDGTVLGRYGRVNLPGI--PSL-------------------------------YDSERFG 1474
            ||| ..:|..||    :.|.||  ||.                               .:|||.|
Zfish   870 EGL-GFEGMGLG----IGLRGIRLPSFKVKRKQPPEPTSTSDNKRVRPSTPVDDELEDEESERMG 929

  Fly  1475 ---GSRGLVGGSARTRSPS-PAE--SPGAEKMLPMSSIQNDFYDQEFSTHMERNPRERLVRHIGA 1533
               |||....||:..|.|: |.|  |.|.|:.......::...|.      |..|.:.....:.:
Zfish   930 RTDGSRVDPAGSSSKRRPARPLELDSEGEEEEETSGKEESSLSDH------EEEPVDDASERLSS 988

  Fly  1534 VKDCNLETVDLVESEGVAAWATLPRLTRYPGLILLNGNSRCHGRMSPVALPEDPLTMRFPVSPLL 1598
            .||  ||..|..:||.                         |...|..:...|            
Zfish   989 GKD--LEEEDEKKSES-------------------------HSSESESSDSSD------------ 1014

  Fly  1599 RSCGEELRKTQQMELGMGPLGNNNNNNYQQKNQNVILALPASASENIAGVLRDLANLLHLAPALT 1663
                :|...:...:.|....|:.::::|:            |:||                    
Zfish  1015 ----DEASSSSSSKSGSDSSGSESSSDYE------------SSSE-------------------- 1043

  Fly  1664 CKIIEDKIGNKLEDQFMNQDDEKHVDFKRPLS----QVSHGHLRKILN----------------- 1707
                |::...:.|::.:..|||:.||.:...|    ..|.....:::.                 
Zfish  1044 ----EEEEEEEEEERIVGMDDEEDVDARTSTSSSTTSTSSSDEEEVVEVKAPSTPTGPPPEEEPN 1104

  Fly  1708 --GRRKLCRSCGNVVHATGL-----------RVPR-HSVPA------LEEQLP------RLAQLM 1746
              ||.:.... ..:.|...:           |.|. ..:||      ||.::|      .|.::.
Zfish  1105 ELGRLEAVDE-AEIDHKPSMVSLIKTKVEEVRPPSPKGLPADELDVDLEVKIPVPKTEASLEEVG 1168

  Fly  1747 DMLPRKSVPPPFVYFCDRACFARFK--------WNGKDGQAEAAS------LLLQPAGGSAVKSS 1797
            ::.|    |.|...|.|.....|.|        ..|.:|.....|      .|..|:....:..|
Zfish  1169 NLRP----PTPTGSFADSDQDTRPKIPTEDFPRTPGHEGPVPLESETTVPRSLPTPSMHLPLPPS 1229

  Fly  1798 NGDSPGSFCASSTAPAEMVVK-QEPEDEDEKTPSVPGNPTNIPAQRKCIVKCFSADCFT----TD 1857
            :...|.|.........:|.|: :.|.:||  .|..||.  ::..:.:.:.|..|.|...    :|
Zfish  1230 HVPDPQSLLPPPETLPDMPVRGRLPTEED--IPRTPGR--DLMDRARGLGKLQSTDTVPVTPGSD 1290

  Fly  1858 SAPSGLELDGTAGAGTG-AGPVNNTVWETETSGLQLEDTRQCVFCNQRGDGQADGPSRLLNFDVD 1921
            :..:|..|......|:. :.|..:.|.   ::|:.....|...|.....|...            
Zfish  1291 TPLTGNSLSSPHILGSPFSYPAQSPVL---SAGIPRTPGRDLTFAPAFPDSAG------------ 1340

  Fly  1922 KWVHLNCALWSNGVYETVSGALMN----FQTAL-----QAGLSQACSACHQPGATIKCFKSRCNS 1977
                |:..|   .::...|..::.    |:..|     ||.|....::...||..          
Zfish  1341 ----LSAGL---PIHRKASSEILEEKPLFKEPLLSASPQASLPNNAASSPFPGPP---------- 1388

  Fly  1978 LYHLPCAIREECVFYKNKSVHCSVHGHAHAGITMGAGAGATTGAGLGGSVADNELSSLVVHRRVF 2042
               ||.|...|.......|...|:.....|                    :..||...::...|.
Zfish  1389 ---LPTASLPEPALPPQGSPPASIENSFPA--------------------SPKELPVPMIDVPVP 1430

  Fly  2043 VD---------RDENRQVATVMHYSELSNLLRVGNMTFLNVGQLLP----------------HQL 2082
            :|         |.:|::........::: |:...::..|.|....|                .:.
Zfish  1431 LDDTPSKKKLVRSKNKKGIQDSEEPQVT-LIEASSLPELPVNNQYPDLPSESIKEEDGEPAFSEK 1494

  Fly  2083 EAFHTPHYIYPIGYKVSRYYWCVRRPNRRCRYICSIAEAGCKPEFRIQVQDAGDKEPEREFRGSS 2147
            |....| .|.|   ||....:.|..|.::.|                           |:.||  
Zfish  1495 EESQVP-TIIP---KVEETSFYVEEPIQKTR---------------------------RQRRG-- 1526

  Fly  2148 PSAVWQQIL----QPITRLRK-------------------------------------------V 2165
                ||::|    .|:...|:                                           .
Zfish  1527 ----WQELLLSMHSPVASPRRPSFMPRSDFEEMTILYDIWNDGIDEEDIRYLKITYDKMLQQDNA 1587

  Fly  2166 HKWLQ--LFPQH-------ISG------EDLFGLTEPAIVRILESLPGIETLTDYRFKYGRNPLL 2215
            |.||.  |:..|       .:|      ||          .|.:.:.|......| :|..:...:
Zfish  1588 HDWLNDTLWVHHPPTNMGSATGVKKKRKED----------GIRDHVTGCARSEGY-YKIDKKDKM 1641

  Fly  2216 EFPLAINPSGAARTEP--KQRQLLVWRKPHTQRTAGSCSTQRMANSAAIAGEVACPYSKQFVHSK 2278
            ::   :|.|.....||  ..:...:..:|.....|||   :|.:....:....:|  ....:...
Zfish  1642 KY---LNSSRLQSEEPDVDTQGKSIPAQPQVSTRAGS---ERRSEQRRLLSSFSC--DSDLLKFN 1698

  Fly  2279 SSQYKKMKQEWRNNVYLARSKIQGLGLYAARDIEKHTMIIEYIGEVIRTEVSEIREKQYESKNRG 2343
            ..:::|.|      :...||.|...||:|...|....|:|||:|:.||..::::|||:||.:..|
Zfish  1699 QLKFRKKK------IRFCRSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIG 1757

  Fly  2344 -IYMFRLDEDRVVDATLSGGLARYINHSCNPNCVTEIVEVDRDVRIIIFAKRKIYRGEELSYDYK 2407
             .||||:|.|.::|||..|..||:|||||||||..:::.|:...:|:|::::.|...||::||||
Zfish  1758 SSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSRQPINVNEEITYDYK 1822

  Fly  2408 FDIEDESHKIPCACGAPNCRKWMN 2431
            |.||||  ||||.|||.|||..:|
Zfish  1823 FPIEDE--KIPCLCGAENCRGTLN 1844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
ePHD2_KMT2C_like 1898..2002 CDD:277136 18/112 (16%)
FYRN 2068..2118 CDD:283589 12/65 (18%)
FYRC 2126..2215 CDD:197781 20/150 (13%)
SET <2266..2431 CDD:225491 69/165 (42%)
SET 2291..2413 CDD:214614 54/122 (44%)
PostSET 2415..2431 CDD:214703 10/15 (67%)
setd1baNP_001038599.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..58
RRM_SF 136..228 CDD:302621 12/91 (13%)
RRM <144..>232 CDD:223796 13/87 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..288 6/18 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..562 74/402 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 838..871 8/32 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 890..1108 46/302 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1160..1341 37/207 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1367..1499 23/165 (14%)
N-SET 1556..1695 CDD:288597 22/157 (14%)
SET <1619..1844 CDD:225491 82/241 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1647..1678 7/33 (21%)
SET 1705..1828 CDD:214614 55/128 (43%)
PostSET 1828..1844 CDD:214703 11/17 (65%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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