DRSC/TRiP Functional Genomics Resources

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Protein Alignment trr and Su(var)3-9

DIOPT Version :10

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster


Alignment Length:146 Identity:53/146 - (36%)
Similarity:76/146 - (52%) Gaps:21/146 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  2302 GLGLYAARDIEKHTMIIEYIGEVIRTEVSEIREKQYESKNRGIYMFRL------DEDRVVDATLS 2360
            |.|:.||..:.|...:.|||||:|.::.:..|.|.|:...| .|:|.|      |.:..:||...
  Fly   489 GWGVRAATALRKGEFVCEYIGEIITSDEANERGKAYDDNGR-TYLFDLDYNTAQDSEYTIDAANY 552

  Fly  2361 GGLARYINHSCNPN-----CVTEIVEVDRDVRIIIFAKRKIYRGEELSYDY-KFDIEDESH---- 2415
            |.::.:|||||:||     |..|.:.|... .::.|..|.|..|||||:|| :.|.||..:    
  Fly   553 GNISHFINHSCDPNLAVFPCWIEHLNVALP-HLVFFTLRPIKAGEELSFDYIRADNEDVPYENLS 616

  Fly  2416 ---KIPCACGAPNCRK 2428
               ::.|.|||.||||
  Fly   617 TAVRVECRCGADNCRK 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
PRK13914 <623..>851 CDD:237555
ePHD2_KMT2C_like 1898..2002 CDD:277136
FYRN 2067..2118 CDD:461787
FYRC 2126..2215 CDD:197781
SET_KMT2C_2D 2278..2430 CDD:380948 53/146 (36%)
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362
Chromo 219..268 CDD:459793
SET_SUV39H 388..634 CDD:380940 53/146 (36%)
Blue background indicates that the domain is not in the aligned region.

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