DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trr and egg

DIOPT Version :9

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_611966.3 Gene:egg / 37962 FlyBaseID:FBgn0086908 Length:1262 Species:Drosophila melanogaster


Alignment Length:587 Identity:110/587 - (18%)
Similarity:184/587 - (31%) Gaps:237/587 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  2011 MGAGAGATTGAG---LGGSVADNELSSLVVH---RRVFVDRDENRQVATVMHYSELSNLLRVGNM 2069
            :.|.:.|.|.||   ..|.|:.:..:|.|.|   ..::|| ||||....|::::...|       
  Fly   739 LAAASSAATPAGGRTNAGGVSTSNSASAVRHLNNSTIYVD-DENRPKGHVVYFTAKRN------- 795

  Fly  2070 TFLNVGQLLPHQLEAFH--TPHYIYPIGYKVSRYYWCVRRPNRRCRYICSIAEAGCKPEFRIQVQ 2132
                    ||.::...|  :|:.::.|.:::..|                               
  Fly   796 --------LPPKMYKCHECSPNCLFKIVHRLDSY------------------------------- 821

  Fly  2133 DAGDKEPEREFRGSSPSAV-----WQQIL----------------QPITRLRKVHKWLQLFPQHI 2176
                          ||.|.     |::::                :.:..|.:||::|:. .:::
  Fly   822 --------------SPLAKPLLSGWERLVMRQKTKKSVVYKGPCGKSLRSLAEVHRYLRA-TENV 871

  Fly  2177 SGEDLFGLT-----------EPAIVRILESLPGIETLTDYRFKYGRN---PLLEFPLAINPSGAA 2227
            ...|.|..|           :|:||:..:...|.|.:......|..|   |...:.....|:...
  Fly   872 LNVDNFDFTPDLKCLAEYSIDPSIVKDTDISKGQEKMAIPLVNYYDNTLPPPCTYAKQRIPTEGV 936

  Fly  2228 RTEPKQRQLLVWRKPHTQRTAGSCSTQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWRNN 2292
            .....:..||.............|:..::    .:||...| ..|:.:.....|||::.:.....
  Fly   937 HLNLDEEFLLCCDCEDDCSDKSKCACWQL----TVAGVRYC-NPKKPIEEIGYQYKRLHEHVPTG 996

  Fly  2293 VYLARS-------------------KIQ-------GLGLYAARDIEKHTMIIEYIGEVIR----- 2326
            :|...|                   |:|       |.||....||.|...|..|.|.::.     
  Fly   997 IYECNSRCKCKKNCLNRVVQFSLEMKLQVFKTSNRGWGLRCVNDIPKGAFICIYAGHLLTETMAN 1061

  Fly  2327 ----------------TEVSEIREKQYE------------------------------------- 2338
                            .||:|..::.||                                     
  Fly  1062 EGGQDAGDEYFADLDYIEVAEQLKEGYESEVDHSDPDAEEDNGGPDAEDDDDFRPNYHYQRKIKR 1126

  Fly  2339 ------------------SKNRGIYMFR----LDE----------------DRVVDATLSGGLAR 2365
                              |:.|.:..|.    |||                ..::||..:|.|.|
  Fly  1127 SSRSGSTQNSSTQSSELDSQERAVINFNPNADLDETVRENSVRRLFGKDEAPYIMDAKTTGNLGR 1191

  Fly  2366 YINHSCNPNCVTEIVEVD-RDVR---IIIFAKRKIYRGEELSYDYKFDIEDESHKI-PCACGAPN 2425
            |.||||:||...:.|.|| .|:|   :..|:...|..|.||:::|.:::.....|: .|.|||||
  Fly  1192 YFNHSCSPNLFVQNVFVDTHDLRFPWVAFFSAAHIRSGTELTWNYNYEVGVVPGKVLYCQCGAPN 1256

  Fly  2426 CR 2427
            ||
  Fly  1257 CR 1258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
ePHD2_KMT2C_like 1898..2002 CDD:277136
FYRN 2068..2118 CDD:283589 6/51 (12%)
FYRC 2126..2215 CDD:197781 19/123 (15%)
SET <2266..2431 CDD:225491 61/289 (21%)
SET 2291..2413 CDD:214614 47/247 (19%)
PostSET 2415..2431 CDD:214703 9/14 (64%)
eggNP_611966.3 HMT_MBD 823..879 CDD:238689 9/56 (16%)
Pre-SET 901..1013 CDD:282838 18/116 (16%)
SET 1022..1239 CDD:214614 45/216 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467603
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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