DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trr and Ehmt1

DIOPT Version :10

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:XP_006233681.2 Gene:Ehmt1 / 362078 RGDID:1307588 Length:1309 Species:Rattus norvegicus


Alignment Length:1603 Identity:304/1603 - (18%)
Similarity:483/1603 - (30%) Gaps:616/1603 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1031 APKELQMKPKAVAMSLPMEQGDESLPEQAEPPLHSEQGATAAGVAPH------------------ 1077
            |||..|...:|     ..::|...:...||..: ||:. |..|...|                  
  Rat    83 APKHTQENTRA-----SPQEGTNRVSRVAENGV-SERD-TEVGKQNHVTADDFMQTSVIGSNGYF 140

  Fly  1078 ------SGGPLVSAQWTNNHLEGGVATTKIPFKPGEPQKRKLPMHPQLDEKQIQQQAEIPISTSL 1136
                  .|.||.:....|:.|.|..|.|    .||...|.:.|                   ::|
  Rat   141 LNKPALQGQPLRTPNTLNSSLPGHAAKT----LPGGASKCRTP-------------------SAL 182

  Fly  1137 PTTPT------GQGTPDKVQLISAIATYVKKSGVPNEAQPIQNQSQGQVQMQAQMQATMQGHLSG 1195
            |.|||      |:|:.|                 ..:.:|..:.:..:|.   :.:.||...:.|
  Rat   183 PQTPTTAPTVPGEGSAD-----------------TEDRKPTASGTDVRVH---RARKTMPKSILG 227

  Fly  1196 QMSGQISGHAAGQ--IPAQMHLQVQHQLHMAVHPQQQQQ------QLHQNQPQNATIPLPVTGQG 1252
            .       |||.:  ...|.|.:.:..::..:....:||      .|||:.|||.........|.
  Rat   228 L-------HAASKDHREVQDHKEPKEDINRNISECGRQQLLPTFPALHQSLPQNQCYMATTKSQT 285

  Fly  1253 AVPIPVPTMESKAGDQRKRR-----------KREVQKPRR--------TNLNAGQAGGALKDLTG 1298
            |.   :|.:.:.|..::|:|           |.:|.|.|.        |:...|..|..:.|.:.
  Rat   286 AC---LPFVLAAAVSRKKKRRMGTYSLVPKKKTKVLKQRTVIEMFKSITHSTVGAKGEKVLDDSA 347

  Fly  1299 PLPAGAMVQLAGMPPGTQYIQGAASGTGHVITSTGQGVTLGGVGASTGASSSPMLKKRVRKFSKV 1363
            ....|..:::......::.::.....                 ||.. |::.|....|..|.|..
  Rat   348 LHVNGESLEMDSEEEDSEELEDEEDR-----------------GAEQ-AAAFPTEDSRTSKESMS 394

  Fly  1364 EEDH----DAFTEKLLTHIRQMQPLQVLEPHLNRNFHFLIGSNETSGGGSPASMSSAASAGSSSA 1424
            |.|.    |..:|:     .|..|                .:.|...||..:.:||.:|.     
  Rat   395 ETDRAAKMDGDSEE-----EQESP----------------DTGEDEDGGDESDLSSESSI----- 433

  Fly  1425 GGGKLKGGSRGWPLSRHLEGLEDCDGTVLGRYGRVNLPGIPSLYDSERFGGSRGLVGGSARTRSP 1489
               |.|                     .|.|.|:.:.|.|.......|            |:|. 
  Rat   434 ---KKK---------------------FLKRRGKTDSPWIKPARKRRR------------RSRK- 461

  Fly  1490 SPAESPGAE--KMLPMSSIQNDFYDQEFSTHMERNPRERLVRHIGAVKDCNLETVDL-------- 1544
            .|:...|:|  |..|.|..|....|.  :.:||                .:|:::||        
  Rat   462 KPSSMLGSEACKSSPGSMEQAALGDS--AGYME----------------VSLDSLDLRVRGILSS 508

  Fly  1545 -VESEGVAAWATLPRLTRYPGLILLNGNSRCHGRMSPVALPEDPLTMRFPVSPLLRSCGEELRKT 1608
             .|:||:|         ..|.::..:|            |.|.||.          ||..|..|:
  Rat   509 QTENEGLA---------NGPDVLETDG------------LHEVPLC----------SCRMETPKS 542

  Fly  1609 QQMELGMGPLGNNNNNNYQQKNQNVILALPASASENIAGVLRDLANLLHLAPALTCKIIEDKIGN 1673
            ::    :..|.||.                ..|:|::...|....|                  :
  Rat   543 RE----ISTLANNQ----------------CMATESVDHELGRCTN------------------S 569

  Fly  1674 KLEDQFMNQDDEKHVDFKRPLSQVSHGHLRKILNGRRKLCRSCGNVVHATGLRVPRHSVPALEEQ 1738
            .::.:.|...:      |.||..:...|..:::  :.:.|..||....|                
  Rat   570 VVKYELMRPSN------KAPLLVLCEDHRGRMV--KHQCCPGCGYFCTA---------------- 610

  Fly  1739 LPRLAQLMDMLPRKSVPPPFVYFCDRACFARFKWNGKDGQAEAASLLLQPAGGSAVKSSNGDSPG 1803
                ...|:..|..|:...|    .:.|.:|.                           |..|..
  Rat   611 ----GNFMECQPESSISHRF----HKDCASRV---------------------------NNASYC 640

  Fly  1804 SFCASSTAPAEMV----------VKQEPEDE---------DEKTPSVPGNPTNIPAQRKCIVKCF 1849
            ..|...|:.|:.|          |...|..|         |..|.|:.|.|.:..:|.       
  Rat   641 PHCGEETSKAKEVTIAKADTTSTVTLAPGQEKSLAAEGRADTTTGSIAGAPEDEKSQS------- 698

  Fly  1850 SADCFTTDSAPSGLELDGTAG-----AGTGAGPVNNTVWETETSGLQLE-------DTRQCVFCN 1902
                 |...||...:..|.||     :|...||...|: |:....|..|       ..:|..|..
  Rat   699 -----TVTQAPECFDPAGPAGFVRPTSGFSQGPGKETL-ESALIALDSEKPKKLRFHPKQLYFSA 757

  Fly  1903 QRGDGQ------ADG--PSRLLNFDVDKWVHLNCALWSNGVYETVSGALMNFQTALQAGLSQACS 1959
            ::|:.|      .||  |    ||.::              :::....|   ..|.:||....|.
  Rat   758 RQGELQKVLLMLVDGIDP----NFKME--------------HQSKRSPL---HAAAEAGHVDICH 801

  Fly  1960 ACHQPGATI-KCFKSRCNSLY------HLPC---------------AIREECVFYKNKSVHCSVH 2002
            ...|.||.| .|.:.:...|.      ||..               |....|:....|..|..|.
  Rat   802 MLVQAGANIDTCSEDQRTPLMEAAENNHLDAVKYLIKAGAQVDPKDAEGSTCLHLAAKKGHYDVV 866

  Fly  2003 GHAHAGITMGAGA---GATTGAGLGGSVADNELSSLVVHRRVFV---DRDENRQVATVMHYSELS 2061
            .:..:...|....   |..|...........:|..|::.:...:   |.:||    ..:|::..|
  Rat   867 QYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEEN----ICLHWAAFS 927

  Fly  2062 NLLRVGNMTF--------LNVGQLLPHQLEAFHTPHYIYPIGYKVSRYYWCVRRPNRRCRYICSI 2118
            ..:.:..:..        :|:....|..:.|                         |..||.|.:
  Rat   928 GCVDIAEILLAAKCDLHAVNIHGDSPLHIAA-------------------------RENRYDCVV 967

  Fly  2119 AEAGCKPEFRIQVQDAGDKEPEREFRGSSP-------SAVWQQILQPITRLRKVHKWLQLFPQHI 2176
            .       |..:..|...|..|    |.:|       |.||..:        ::.|.||     .
  Rat   968 L-------FLSRDSDVTLKNKE----GETPLQCASLNSQVWSAL--------QMSKALQ-----D 1008

  Fly  2177 SGEDLFGLTEPAIVRIL----ESLP-----GIET-LTDYRFKYGRNPLLEFPLAINPSGAARTEP 2231
            |..|.....|..:.|.:    |.:|     .::: |....:||.....:..|:.|:         
  Rat  1009 SAPDKPVAVEKTVSRDIARGYERIPIPCVNAVDSELCPTNYKYVSQNCVTSPMNID--------- 1064

  Fly  2232 KQRQLLVWRKPHTQR--TAGSCSTQRMANSAAIAGEVA--CPYSK-----------------QFV 2275
              |.:     .|.|.  ....||     :|..:.|:::  |.|.|                 :..
  Rat  1065 --RNI-----THLQYCVCVDDCS-----SSTCMCGQLSMRCWYDKDGRLLPEFNMAEPPLIFECN 1117

  Fly  2276 HSKSSQYKKMKQEWRN------------NVYLARSKIQGLGLYAARDIEKHTMIIEYIGEVIRTE 2328
            |:.|.        |||            .:.|.|::..|.|:.:.:||...|.:.||:||:|...
  Rat  1118 HACSC--------WRNCRNRVVQNGLRARLQLYRTQDMGWGVRSLQDIPLGTFVCEYVGELISDS 1174

  Fly  2329 VSEIREKQYESKNRGIYMFRLD----EDRVVDATLSGGLARYINHSCNPNCVTEIVEVD----RD 2385
            .:::||:.       .|:|.||    |...:||...|.::|:|||.|.||.|...|.:.    |.
  Rat  1175 EADVREED-------SYLFDLDNKDGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMSHQDLRF 1232

  Fly  2386 VRIIIFAKRKIYRGEELSYDYKFDIEDESHKI-PCACGAPNCR 2427
            .||..|:.|.|..||:|.:||.....|...|: .|.||:|.||
  Rat  1233 PRIAFFSTRLIQAGEQLGFDYGERFWDVKGKLFSCRCGSPKCR 1275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
PRK13914 <623..>851 CDD:237555
ePHD2_KMT2C_like 1898..2002 CDD:277136 25/133 (19%)
FYRN 2067..2118 CDD:461787 7/58 (12%)
FYRC 2126..2215 CDD:197781 21/105 (20%)
SET_KMT2C_2D 2278..2430 CDD:380948 54/171 (32%)
Ehmt1XP_006233681.2 EHMT_ZBD 527..657 CDD:411018 36/236 (15%)
ANKYR 731..987 CDD:440430 52/317 (16%)
ANK repeat 785..814 CDD:293786 9/31 (29%)
ANK repeat 816..847 CDD:293786 3/30 (10%)
ANK repeat 849..881 CDD:293786 5/31 (16%)
ANK repeat 883..914 CDD:293786 4/30 (13%)
ANK repeat 916..947 CDD:293786 4/34 (12%)
ANK repeat 949..980 CDD:293786 8/62 (13%)
SET_EHMT1 1047..1277 CDD:380933 69/265 (26%)
Blue background indicates that the domain is not in the aligned region.

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