DRSC/TRiP Functional Genomics Resources

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Protein Alignment trr and Tbrg1

DIOPT Version :9

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_001009344.2 Gene:Tbrg1 / 300521 RGDID:1305123 Length:406 Species:Rattus norvegicus


Alignment Length:273 Identity:59/273 - (21%)
Similarity:109/273 - (39%) Gaps:78/273 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1986 REECVFYKNK--SVHCSVHGHAHA-------------GITMGA----GAGATTGAGLGGSVADNE 2031
            :||..:...|  .:|....|...|             |:|...    |||.:|||          
  Rat    69 KEERRYLLKKLLQIHALTEGEPQAAAPSHSSSLPLAYGVTSSVGTIQGAGPSTGA---------- 123

  Fly  2032 LSSLVVHRRVFVDRD---------ENRQVATVMHYSELSNL----------------------LR 2065
                   ...|..:.         ||.::..:...|:...:                      :.
  Rat   124 -------EEPFAKKSKKEKKEKGKENSKLEVLKKTSKRKKMEGGARKLVRPIALDPSGQPVFPIG 181

  Fly  2066 VGNMTFLNVGQLLPHQLEAFHTPHYIYPIGYKVSRYYWCVRRPNRRCRYICSIAEAGCKPEFRIQ 2130
            :|.:|..::|:::.:: ..||..:.|||:||..:|.|..::.|:::|.|.|.|.:.|.:|:|.|.
  Rat   182 LGGLTVYSLGEIITNR-PGFHDENAIYPVGYCSTRVYASMKCPDQKCLYTCQIKDGGVQPQFEIV 245

  Fly  2131 VQDAGDKEPEREFRGSSPSAVWQQILQPITRLRKVHKWLQLFPQHIS-GEDLFGLTEPAIVRILE 2194
            .:|    :|.....|||..|.::::|:.|:....     :|.|..:| |.|.||.:.|.|..:::
  Rat   246 PED----DPRNTIVGSSADACYEELLRAISAATG-----KLMPNPLSCGADFFGFSHPTIHNLIQ 301

  Fly  2195 SLPGIETLTDYRF 2207
            |.|..:...:|::
  Rat   302 SCPEAQNCVNYQW 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
ePHD2_KMT2C_like 1898..2002 CDD:277136 4/17 (24%)
FYRN 2068..2118 CDD:283589 15/49 (31%)
FYRC 2126..2215 CDD:197781 22/83 (27%)
SET <2266..2431 CDD:225491
SET 2291..2413 CDD:214614
PostSET 2415..2431 CDD:214703
Tbrg1NP_001009344.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..144 9/44 (20%)
FYRN 183..233 CDD:399155 16/50 (32%)
FYRC 239..320 CDD:399156 23/85 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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