DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trr and set3

DIOPT Version :9

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_594837.1 Gene:set3 / 2541899 PomBaseID:SPAC22E12.11c Length:859 Species:Schizosaccharomyces pombe


Alignment Length:940 Identity:185/940 - (19%)
Similarity:298/940 - (31%) Gaps:348/940 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 DADKQSEYRIS-TPRNSQSNPLLHR-----NTAFTSFTKKEGASSSASSSSSTASVISIEPSGSG 193
            ||||..:.::: ..|..:.:.:|.|     |...||| .|.|||.:.|:|..             
pombe    54 DADKAHKIQLARLQREEEQSRILSRSRSSNNKRRTSF-GKNGASPTHSASPR------------- 104

  Fly   194 QDHAENSGKSEDLDYVLMPASGADSSTSVGNSTGTGTPAGTPIGATTSTIILNA----------- 247
              ...|:|           |:||..|.|. ||:.:|:...:..|||    :.||           
pombe   105 --QGNNTG-----------ANGALFSQST-NSSNSGSYRNSVTGAT----LPNAHAPHSQNRRRR 151

  Fly   248 -----NNGTAGVSGAGTTTILTQKSGHTNY-----NIFNTTATGSQTPTTTLLNRVNLHPKMKTQ 302
                 |...|.::.|....:.   |.|..|     |.|:.:|         |....||..|...:
pombe   152 SNHLNNPPEAPITEASNEYVY---SFHLEYVPLESNTFSASA---------LEYSKNLDLKNLDE 204

  Fly   303 LMVNAKKLSEVTQTTAKVSIGN----KTISVPLLKPLMSASGAA--------------------- 342
            ..|.......|..:::|.....    .|..:|...|:|...|..                     
pombe   205 SEVLMDGCQVVPISSSKFCCSRFGLVSTCEIPPNTPIMEVKGRVCTQNEYKSDPKNQYNILGAPK 269

  Fly   343 -----TAGGATIVESK------QLLQPGGQVTTVMSAAQQSGGQQV-----HPHVH--------- 382
                 .:....:|:|:      :..:.|.|..:|:|:...:|...|     :...|         
pombe   270 PHVFFDSNSQLVVDSRVAGSKARFARKGCQSNSVVSSVYMNGSNSVPRFILYSTTHIAPETEIIG 334

  Fly   383 ------SHAHHNFTKLIKRGPKNS----------GTIVSFSGL---------------QIKPANT 416
                  ||....|...:.|...|.          .|.:||:..               .||.|..
pombe   335 DWTLDISHPFRQFAPGMSRPSFNMEELELLSEVLSTFLSFNECASQDKKNCVFSRVTKYIKAARR 399

  Fly   417 KIVATKV-VSKKMLQLQQHQQQIQQQQQLQQLQVTSGGGLAPPTGSIVTITTTNPSQTYAMVQDS 480
            ...|.:| |:|..|.|                                     .||.|      .
pombe   400 ASTANRVSVAKDRLSL-------------------------------------TPSST------P 421

  Fly   481 ATVGPAAHSEDDAPAPRKITA-YSENLQK---------ILNKSKSQESTGGPEEFTNINSVVIKP 535
            :|..||    :..|.|...|: |:::|::         ||.|..:.:|.  |.|...|: ||::|
pombe   422 STPSPA----ESLPQPSNPTSVYAKSLKEFWLDKYRLSILQKWPAVKSL--PTESVGID-VVMEP 479

  Fly   536 LDKNTLNCPPSFNIFKQQQHSQAAQSQSISAVGSGAGTPVTFTMASGNASDLATTSTVSVSAGTI 600
                  ...||   .|:::.::..||...|.....:.......:|     ||.|.|.|.::.   
pombe   480 ------KLQPS---VKEKKPTKDLQSPLPSVEEDSSNRDKKTDIA-----DLHTDSKVGIAD--- 527

  Fly   601 CINSPMMGTRPIISIQNKNISLVLSKTTMAQQKPKMITTTT---------LSSQAALQMHHALIQ 656
             :.||:   .|..::|:..   .|.|.  .:.:...||.||         ||.::|..:.|....
pombe   528 -VLSPI---SPDAALQSDG---PLKKA--KEPEESSITPTTPPSFNVGESLSRRSASPLQHPRTS 583

  Fly   657 DSSADKAGSSANS-----------GSATSGASMQLKLTTAN--------TPTKLSVSLAPDVVKL 702
            ....||.......           ||.....|::.:.:.||        ....||:...|:..|.
pombe   584 PDMLDKTSPCKRGLGTITTVHKKHGSVDHLPSVKRRRSIANDFHGKPDYNKRSLSIERKPEAFKT 648

  Fly   703 E-----------EVGSESKAKLLVKQEAVVKDSTGTPTSEERAEEIGTPEKRLNANATMTAINQV 756
            :           ...|:||.||             .|:|:|::..:     ..|...|:...:.|
pombe   649 KGDRPHKVHPSFHRNSDSKLKL-------------EPSSKEKSGSM-----FFNTLRTVKDKSHV 695

  Fly   757 QN-QSANQIQMATSTSTASN---------------------PSTPNPTV--------NATPMNN- 790
            .: |.::.:..:....|.|:                     |:.|.|.:        |..|.|| 
pombe   696 HDTQRSSDVNFSRQNGTRSHSPSVSPVGFSFDKSPVTTPPLPTAPAPVITSRHALVNNQFPTNNP 760

  Fly   791 -----QRSAAED--NALLKQLLQNNSSSHSLNQISITSAHVGSASASAPLSARKVINV------R 842
                 :.:..:|  |||.....:|..:| :|.|.|:......|||| .|.||.|.:::      |
pombe   761 NILDHKANNGDDISNALNTSRSENKPNS-NLVQGSVVKPSNTSASA-LPTSAPKKLSLSEYRQRR 823

  Fly   843 APSMGKVRSLEDQ----LARPVIPPVPTAT 868
            ..::...:|.::|    .|||  ..||.||
pombe   824 QQNILHQQSKDNQAHGDTARP--HTVPAAT 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513 30/156 (19%)
ePHD2_KMT2C_like 1898..2002 CDD:277136
FYRN 2068..2118 CDD:283589
FYRC 2126..2215 CDD:197781
SET <2266..2431 CDD:225491
SET 2291..2413 CDD:214614
PostSET 2415..2431 CDD:214703
set3NP_594837.1 PHD_MLL5 5..48 CDD:277025
SET 215..343 CDD:214614 17/127 (13%)
SET 284..826 CDD:225491 122/637 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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