DRSC/TRiP Functional Genomics Resources

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Protein Alignment trr and SPCC645.13

DIOPT Version :9

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_001342882.1 Gene:SPCC645.13 / 2538700 PomBaseID:SPCC645.13 Length:721 Species:Schizosaccharomyces pombe


Alignment Length:768 Identity:145/768 - (18%)
Similarity:264/768 - (34%) Gaps:228/768 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 SSSASSSSSTASVISIEPSGSGQDHAENSGKSEDLDYVLMPASGAD--------SSTSVGNSTGT 228
            |.:......||.::: ...|:.:::.||:..|.|....:...|||:        ::::||.:|.:
pombe    79 SPNKDEEHQTADLLA-SNEGNEKNNEENNVVSSDSKEAITKESGAELESSEPASTNSNVGMTTRS 142

  Fly   229 GTPA-GTPIGATTSTIILNANNGTAGVSGAGTTTILTQKSGHTNYNIFNTTATGSQTPTTTLLNR 292
            |..: .||||:||.....:..:........|||...|::|    .|...|:...:...|......
pombe   143 GRQSPRTPIGSTTPKSSHSPPSTRKRRGSVGTTATHTKRS----KNAPKTSPKDASNETADQEKE 203

  Fly   293 VNLHPKMKTQLMVNAKKLSEVTQTTAKVSIGNKTISVPLLKPLMSASGAATAGGATIVESKQLLQ 357
            ::||           ..:.|: |...:.|:....:|| ..|.:..|......|...:..:...||
pombe   204 LSLH-----------TSIDEI-QNPVRKSVAKAWVSV-FEKIIEKAKLEGVQGLEDLNSTSLALQ 255

  Fly   358 PGGQVTTVMSAAQQSGGQQVHPHVHSHAHHN----------FTKLIKRGP-------KNS---GT 402
            ....:..|:|....          ||...:|          |..:..:.|       ||.   ..
pombe   256 LEHIMFMVLSYTTD----------HSLTPNNKYREKFRALRFNLVDDKNPAFRARVLKNEISFND 310

  Fly   403 IVSFSGLQIKPANTKIVATKV--VSKKMLQLQQH----------QQQIQQQQQLQQLQVTSGGGL 455
            :|:.|..::...:.|.:|.::  .|.:...::||          :.::.||.:|         |:
pombe   311 LVNLSSEEMANPDLKNLAEEIRQQSTENTVIKQHLIAPRDRLLDEDKLTQQDEL---------GI 366

  Fly   456 A---------PPTGSIVTITTTNPSQTYAMVQDSATVGPAAH---SEDDAPAPRKITAYSENLQK 508
            |         ||...:..|:......|.    ||.:.....|   ||||          :.|..|
pombe   367 AENDDAMFPKPPGELVAPISIAEEEPTI----DSKSPTLPEHNPLSEDD----------TSNGDK 417

  Fly   509 ILNKSKSQESTGGPEEFTNINSVVIKPLDKNTLNCPPSFNIFKQQQHSQAAQSQSISAVGSGAGT 573
            ...:..|...|   :...|:.|:|       .::.|...:|.:::   ..|::.|.|:..|    
pombe   418 AAKRKGSFNDT---KPIVNVPSIV-------EIDDPTILDIVEEE---PLARNDSFSSPYS---- 465

  Fly   574 PVTFTMASGNASDLATTS----------TVSVSAGTI------CINSPMMGTRPIISIQNKNISL 622
                     .|.|:|..|          |..|...|:      .:|  :.|     .:...::..
pombe   466 ---------PAEDMAEESEFFGMKEKIWTGKVKMATVSEFHANALN--LFG-----DVSASHLFE 514

  Fly   623 VLSKTTMAQQKPKMITTTTLSSQAALQMHHALIQDSSADKAGSSANSGSATSGASMQLKLTTANT 687
            :||.|.:.:.:        :|..:.||..|||                              ..|
pombe   515 ILSATALIEGR--------ISVSSVLQYFHAL------------------------------RKT 541

  Fly   688 PTK--LSVSLAP--------DV-----VKLEEVGSESKAKLLVKQEAVVKDSTGTPTSE--ERAE 735
            |:|  ::|...|        |:     ||....|........||...::...:|....|  :...
pombe   542 PSKEIIAVLFVPTEQNSQGFDILYDYFVKRNRYGVLHSKSNSVKDAYIIPMPSGNSVPELLDLLP 606

  Fly   736 EIGTPEKRLNANATMTAINQVQNQSANQ---IQMATSTSTASN--PSTPNPTVNATPMNNQRS-- 793
            ::..|:.| |....|...  |.|:|:::   ::.||..:|::|  ||| ..:.:.||.|...|  
pombe   607 KVDLPKDR-NFQYFMGLF--VLNKSSSRHESVERATPITTSTNGIPST-YQSASGTPTNPVHSYP 667

  Fly   794 ---------AAEDNALLKQLLQNNSSSHSLNQISITSAHVGSASASAPLSARK 837
                     ...|..|:|.:::||....:...::|....:.:|.::|...|.|
pombe   668 SLESIINALTPSDMLLIKDVVENNPQIRANPSLAINPQFMQNAISAAQKKASK 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513 30/144 (21%)
ePHD2_KMT2C_like 1898..2002 CDD:277136
FYRN 2068..2118 CDD:283589
FYRC 2126..2215 CDD:197781
SET <2266..2431 CDD:225491
SET 2291..2413 CDD:214614
PostSET 2415..2431 CDD:214703
SPCC645.13NP_001342882.1 PHD_SF 22..66 CDD:328929
TFS2M 215..330 CDD:128786 21/125 (17%)
SPOC 474..624 CDD:311609 32/197 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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