DRSC/TRiP Functional Genomics Resources

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Protein Alignment trr and Tbrg1

DIOPT Version :9

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_079565.2 Gene:Tbrg1 / 21376 MGIID:1100877 Length:406 Species:Mus musculus


Alignment Length:296 Identity:64/296 - (21%)
Similarity:118/296 - (39%) Gaps:81/296 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1966 ATIKCFKSRCNSLYHLP---CAIREECVFYKNK--SVHCSVHGHAHA-------------GITMG 2012
            ||:....|.|:.:..|.   ...:||..:...|  .:|....|...|             |:|..
Mouse    46 ATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEPQAAAPSHSSSLPLPYGVTSS 110

  Fly  2013 A----GAGATTGAGLGGSVADNELSSLVVHRRVFVDRD---------ENRQVATVMHYSELSNL- 2063
            .    |||.:|||                 ...|..:.         ||.::..:...|:...: 
Mouse   111 VGTMQGAGPSTGA-----------------EEPFAKKSKKEKKEKGKENSKLEVLKKTSKKKKME 158

  Fly  2064 ---------------------LRVGNMTFLNVGQLLPHQLEAFHTPHYIYPIGYKVSRYYWCVRR 2107
                                 :.:|.:|..::|:::.:: ..||..:.|||:||..:|.|..::.
Mouse   159 GGARKLVRPIALDPSGQPVFPIGLGGLTVYSLGEIITNR-PGFHDENAIYPVGYCSTRVYASMKC 222

  Fly  2108 PNRRCRYICSIAEAGCKPEFRIQVQDAGDKEPEREFRGSSPSAVWQQILQPITRLRKVHKWLQLF 2172
            |:::|.|.|.|.:.|.:|:|.|..:|    :|:....|||..|.::::|:.|:....     :|.
Mouse   223 PDQKCLYTCQIKDGGVQPQFEIVPED----DPQNTIVGSSADACYEELLRAISATTG-----KLM 278

  Fly  2173 PQHIS-GEDLFGLTEPAIVRILESLPGIETLTDYRF 2207
            |..:| |.|.||.:.|.|..:::|.|..:...:|::
Mouse   279 PNPLSCGADFFGFSHPTIHNLIQSCPEAQNCVNYQW 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
ePHD2_KMT2C_like 1898..2002 CDD:277136 9/40 (23%)
FYRN 2068..2118 CDD:283589 15/49 (31%)
FYRC 2126..2215 CDD:197781 22/83 (27%)
SET <2266..2431 CDD:225491
SET 2291..2413 CDD:214614
PostSET 2415..2431 CDD:214703
Tbrg1NP_079565.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 109..144 9/51 (18%)
FYRN 184..233 CDD:283589 15/49 (31%)
FYRC 239..314 CDD:283590 23/83 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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