DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trr and set-26

DIOPT Version :9

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_001370101.1 Gene:set-26 / 178463 WormBaseID:WBGene00013106 Length:1645 Species:Caenorhabditis elegans


Alignment Length:1335 Identity:263/1335 - (19%)
Similarity:419/1335 - (31%) Gaps:442/1335 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   714 LVKQ----EAVVKDSTGT------------PTSEERAEEIGTPEKRLNANATMTAI-------NQ 755
            :|||    :||...|.||            |::....::...|.:....|..|.|.       ||
 Worm   192 IVKQWMPEDAVGPGSPGTQYRRNQQTGGGLPSTSVAPQQQQLPVRHNIQNRPMVAAQPFSIGGNQ 256

  Fly   756 VQ----NQSANQIQMATSTSTASNPSTPNPTVNATPMNNQ---RSAAEDNALLKQLLQNNSSSHS 813
            |:    ....:::|..............|...|..||..|   |::...||:.:...|.....|.
 Worm   257 VEYGGIGGMDSRMQQRGVVRDGPQYRVMNDFGNGLPMRGQLPPRNSPAANAINRVREQQQQMYHQ 321

  Fly   814 LNQISITSAHVGSASASAPLSARKVINVRAPSMGKVRSLEDQLARPV--IPPVPTATQA----AG 872
            ..........|.:.:|..|.|.:.::|. .|..|         |.|:  :||     ||    .|
 Worm   322 AGARGSLQQRVPAPAAPTPGSYQHIVNA-VPVGG---------ANPMRRVPP-----QARPGMIG 371

  Fly   873 SSSSSGSVATSTTTTTVASGGSSQQVATASATALPVSAVAITTPGVGGEAK--LEQKSDQ----- 930
            .::::........|..:.:......||.|:| |.|...|.:....:..|.:  |:|.:.|     
 Worm   372 GAANNNRARPIHVTRPMDTQEFEHPVAPAAA-APPRRVVDVAPHRMTPEQRQELQQMNRQRAAPQ 435

  Fly   931 -PAAIMQNQ------------SQNQAPPP----------PPPPQQQQQQQLHQPQQLQPSPHQVK 972
             |||..|..            |.::||.|          |.....::..|.||...|:|...|||
 Worm   436 FPAAAAQRSAEKIVIQQRPGASSSRAPRPSMAQEDLLRSPTRRLSERVPQEHQTPVLEPRRFQVK 500

  Fly   973 QTVQIVSKETSFISGPVAAKTLVTEATSKPAELLPPPPYEMATAPISNVTISISTKQAAPKELQM 1037
            .|      :|.....|.|:..|..:.|.:      .||.|.|.|....     ....|||::   
 Worm   501 VT------DTYSTPIPKASDQLPAQLTEE------DPPEESAAAAAPE-----DVPDAAPED--- 545

  Fly  1038 KPKAVAMSLP---MEQGDESLPEQAEPPLHSEQGATAAGVAPHSGGPLVSAQWTNNHLEGGVATT 1099
            .||.:....|   |.| :|.....|......|:..::|.:.|....|                 .
 Worm   546 PPKGILKPTPPHRMTQ-EEKNAHFARLTTDKEKPTSSASILPQDAAP-----------------P 592

  Fly  1100 KIPFKPGEPQKRKLPMHPQLDEKQIQQQAEIPISTSLPTTPTGQGTPDKVQLISAIATYVKKSGV 1164
            .:|  |..|....|..|.| ||.....|:   :..|.|..|   .||...:.||.||..::.|  
 Worm   593 HVP--PPPPPPLVLRPHHQ-DETLAMVQS---VFESKPRQP---DTPKDKEAISKIADLLRFS-- 646

  Fly  1165 PNEAQPIQNQSQGQVQMQAQMQATMQGHLSGQMSGQISGHAAGQIPAQMHLQVQHQLHMAVHPQQ 1229
               |.....||....   |..|.|            :||.||.....|||.|.|.|.|..: |..
 Worm   647 ---ADEFTGQSGSSA---AARQRT------------VSGSAARAQTYQMHHQQQQQHHHQM-PMD 692

  Fly  1230 QQQQLHQNQPQNATIPLPVTGQGAVPI-----PVPTMESKAGDQRKRRKREVQKPRRTN-----L 1284
            |::: |.:...:|.:       ||:|:     |.|..:.:..|....|.|  .:|:.|.     :
 Worm   693 QRKR-HSSGRYDALM-------GAMPLQQQPPPPPPSQFQHTDSIAHRPR--GRPKGTRHPSVAV 747

  Fly  1285 NAGQAGGALKDLTGPLPAGAMVQLAGMPPGTQYI-QGAASGTG---------------------- 1326
            ...::|||                ..:||..|.: ..|.:|..                      
 Worm   748 QPQRSGGA----------------RTLPPRAQTVAMSARNGANAKNSDSESEGIDEAAEESWTMR 796

  Fly  1327 -HVITSTGQGVTLGGVGASTGASSSPM---LKKRVRKF------------SKVEEDHDAFTEKLL 1375
             |.....|.|.|:...|..|....:.|   ||....|:            ||.|...:  .|::|
 Worm   797 CHCGMDHGDGDTIECEGCKTWQHMACMGLTLKSNTSKYKCEMCLPRRLPVSKAEAARE--QERIL 859

  Fly  1376 THIR--------------------------------QMQPLQVLEPHLN----RNFHFLIGSNET 1404
            ..:|                                |.||.:.....||    :....|.|..:|
 Worm   860 NRLRAAAKKQKRKSEPVEQKQKSQPSTSRKSAPMALQQQPAEPRVAQLNDYSKQASALLFGMEQT 924

  Fly  1405 SGGGSPASMSSAASAGSSSAGGGKLKGGSRGWPLSRHLEGLEDCD-----GTVLGRYGRVNL--- 1461
            :|..:..:.|             :|...:|...:...:|.|...|     ..:|...|.|::   
 Worm   925 AGADTLLAES-------------RLHKKARRMFVEEAVEALVTTDLVQIRQVILEVNGHVSMSNE 976

  Fly  1462 ----PGIPS---LYDSERFGGSRGLVGGSARTRSPSPAESPGAEKMLPMSSIQNDFYDQEFSTHM 1519
                ||..:   :||        ||:.|:|       .|..|..:.|.....:....|.:|:.. 
 Worm   977 VKRQPGGGNCIFMYD--------GLMKGTA-------GEDMGDGQELVCIDTKRKGNDTKFTRR- 1025

  Fly  1520 ERNPRERLVRHIGAVKDCNLETVDLVESEGVAAWATLPRLTRYPGLILLNGNSRCHGRMSPVALP 1584
                        ..|.:|.|:.|       :.:.|||       |::::  .::...|.:.|.||
 Worm  1026 ------------SCVPNCVLKHV-------LGSNATL-------GIMIV--ATKDITRNTEVTLP 1062

  Fly  1585 EDPLTMRFPVSPLLRSCGEELRKTQQMELGMGPLGNNNNNNYQQKNQNVILALPASASENIAGVL 1649
            .|   ..:..|.:...|.|.:::.|                          |.|..:..      
 Worm  1063 FD---ADWRESEVELECAEHMKELQ--------------------------ACPFESER------ 1092

  Fly  1650 RDLANLLHLAPALTCKIIE-----DKIGNKLEDQF----------MNQDDEKHVDFKRPLSQVSH 1699
            |..|...|.|.....:..|     |:...:||::.          |::.::..::.::...:...
 Worm  1093 RRFAAERHRAMDHKKREAEEARRADEERRRLEEEVRRERAAKTKQMDEAEKARLEAEKAAEKEKK 1157

  Fly  1700 GHLRKILNGRRKLCRSCGNVVHATGLRVPR--HSVPALEEQLPRLAQLMDMLPRKSVPPPFVYFC 1762
            ...|:....|:|:      .|.|:....|.  :|:.|.||:  |:.|..:|              
 Worm  1158 AKEREEAKERKKM------EVEASAAAAPESSNSITAREER--RIQQAEEM-------------- 1200

  Fly  1763 DRACFARFKWNGKDGQAEAASLLLQPAGGSAVKSSNGDSPGSFCASSTAPAEMVVKQEPEDEDEK 1827
                |.|.:..||..:|.              :.|...:||...|:.||..          ||..
 Worm  1201 ----FRRQEEEGKRKEAR--------------RRSKSVTPGVLEAAGTAAR----------EDAP 1237

  Fly  1828 TPSVPGNPTNIPAQRKCIVKCF--SADCFTTDSAP 1860
            ..|:|....:.||.|:.:.:..  |...|.|.:.|
 Worm  1238 EASIPAPAPSPPASRRSVSRTTQPSTSSFATPTEP 1272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
ePHD2_KMT2C_like 1898..2002 CDD:277136
FYRN 2068..2118 CDD:283589
FYRC 2126..2215 CDD:197781
SET <2266..2431 CDD:225491
SET 2291..2413 CDD:214614
PostSET 2415..2431 CDD:214703
set-26NP_001370101.1 PRK03427 <9..>135 CDD:235124
PHD_Bye1p_SIZ1_like 796..839 CDD:277045 10/42 (24%)
SET_SETD5-like 935..1067 CDD:380927 34/178 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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