DRSC/TRiP Functional Genomics Resources

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Protein Alignment trr and met-1

DIOPT Version :10

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_491340.2 Gene:met-1 / 172026 WormBaseID:WBGene00016603 Length:1604 Species:Caenorhabditis elegans


Alignment Length:233 Identity:75/233 - (32%)
Similarity:112/233 - (48%) Gaps:40/233 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  2216 EFPLAINPSGAARTEPKQRQLLVWRKPHTQRTAGSCSTQRMANSAAIAGEVACPYSKQFVHSKSS 2280
            ||.|........|...|::...:..:.|  ||.|:||.....|.|.:   ..||.|.| |..|:.
 Worm   617 EFELISESKYLTRNANKKKTESLTCECH--RTGGNCSDNTCVNRAML---TECPSSCQ-VKCKNQ 675

  Fly  2281 QYKKMKQEWRNNVYLARSKIQGLGLYAARDIEKHTMIIEYIGEVIRTEVSEIREKQYESKNR--- 2342
            ::.|.|.......:...:|  |.||.|.:||:|...||||||||:..:..|.|:.:|.:..:   
 Worm   676 RFAKKKYAAVEAFHTGTAK--GCGLRAVKDIKKGRFIIEYIGEVVERDDYEKRKTKYAADKKHKH 738

  Fly  2343 ------GIYMFRLDEDRVVDATLSGGLARYINHSCNPNCVTEIVEVDR---DV-RIIIFAKRKIY 2397
                  |:|        .:|||:.|..:|::||||:||.:.|...|.|   || |:..|:||.|.
 Worm   739 HYLCDTGVY--------TIDATVYGNPSRFVNHSCDPNAICEKWSVPRTPGDVNRVGFFSKRFIK 795

  Fly  2398 RGEELSYDYKF-----DIEDESHKIPCACGAPNCRKWM 2430
            .|||:::||:|     |.:.      |.||:.:|..|:
 Worm   796 AGEEITFDYQFVNYGRDAQQ------CFCGSASCSGWI 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
PRK13914 <623..>851 CDD:237555
ePHD2_KMT2C_like 1898..2002 CDD:277136
FYRN 2067..2118 CDD:461787
FYRC 2126..2215 CDD:197781
SET_KMT2C_2D 2278..2430 CDD:380948 56/169 (33%)
met-1NP_491340.2 PRK12323 <23..263 CDD:481241
AWS 637..682 CDD:197795 15/50 (30%)
SET 682..828 CDD:394802 54/162 (33%)
WW 1366..1393 CDD:238122
Blue background indicates that the domain is not in the aligned region.

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