DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14818 and Pde6d

DIOPT Version :9

Sequence 1:NP_001259146.1 Gene:CG14818 / 31147 FlyBaseID:FBgn0026088 Length:96 Species:Drosophila melanogaster
Sequence 2:NP_032827.1 Gene:Pde6d / 18582 MGIID:1270843 Length:150 Species:Mus musculus


Alignment Length:12 Identity:4/12 - (33%)
Similarity:8/12 - (66%) Gaps:0/12 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LDAVEQRTDDIM 53
            :.|.::|..||:
Mouse     1 MSAKDERARDIL 12

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14818NP_001259146.1 UPF0184 1..83 CDD:112485 4/12 (33%)
Pde6dNP_032827.1 GMP_PDE_delta 10..149 CDD:398820 2/3 (67%)
Required for association with membranes. /evidence=ECO:0000250 144..150
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.845196 Normalized mean entropy S242
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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