DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14805 and WDR18

DIOPT Version :9

Sequence 1:NP_569954.1 Gene:CG14805 / 31146 FlyBaseID:FBgn0023514 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_001359014.1 Gene:WDR18 / 57418 HGNCID:17956 Length:432 Species:Homo sapiens


Alignment Length:499 Identity:143/499 - (28%)
Similarity:240/499 - (48%) Gaps:85/499 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDAVEALFISTSSEDNTTCSVQDLRTGTDLMRYKGGGCAQHHSLNMIHLNYVMAANSAKPLLHV 65
            |...:|....:.|:....:|.|.:|.:|.:|:.|:||. |....|.:::..|::||...|..:..
Human     1 MAAPMEVAVCTDSAAPMWSCIVWELHSGANLLTYRGGQ-AGPRGLALLNGEYLLAAQLGKNYISA 64

  Fly    66 WPINKQEQMAGLRFVVPGKVNALALTPDGNFLVAGIQENIYLWHMSSGRMLNTLSKHYQAITCLR 130
            |.:.:::|:. .:.:.||.|..|..:|:|.:::||:.|:|:||.:|:|.:|..||:|||.::||:
Human    65 WELQRKDQLQ-QKIMCPGPVTCLTASPNGLYVLAGVAESIHLWEVSTGNLLVILSRHYQDVSCLQ 128

  Fly   131 FTDNGEHFISGGKDGAVLVWDL--TFSAAPLDTGGGKDSTEPLYSFNDHGLAVTDLYSGIGGIRS 193
            ||.:..||||||||..||||.|  ...|.|      .....|.:.::.|.|.:|||:.|.||..:
Human   129 FTGDSSHFISGGKDCLVLVWSLCSVLQADP------SRIPAPRHVWSHHALPITDLHCGFGGPLA 187

  Fly   194 YLYTVSLDRCCKVYDLCGGVLLLSVVFPVALHSVIVSKMETRVYVGSSDGKVFVFNMENAP--RM 256
            .:.|.|||:..|::::..|.|||||:|.|::.:|.:...|..::.|.|:|.:|..::...|  |.
Human   188 RVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGSEGSIFQVDLFTWPGQRE 252

  Fly   257 KEYHLEGEEIQAFVGHTYGKAITCLALNISATTLVSGGEDNQVCVWDVGSRQLIKSLSQKGSVTN 321
            :.:|.|.:..:.|.||.  ..:|||:::...:.|:||..|..|.:|||.|:|.|::::.||.|||
Human   253 RSFHPEQDAGKVFKGHR--NQVTCLSVSTDGSVLLSGSHDETVRLWDVQSKQCIRTVALKGPVTN 315

  Fly   322 LHIRLLSPAIFLPEHKQPQMFADSLKRMISPWDENDCIELFDPDYSG----------GRKTPELD 376
            ..| ||:|...|....:|.:......:.:...:..|     :|.:.|          |.:...||
Human   316 AAI-LLAPVSMLSSDFRPSLPLPHFNKHLLGAEHGD-----EPRHGGLTLRLGLHQQGSEPSYLD 374

  Fly   377 YTQSHPGTDEEIILKLIASMSSGKNEDDEGIEAETKATDVEDSEVEEEEPESEPMETASKEAESE 441
            .|       |::...|.::|                                            |
Human   375 RT-------EQLQAVLCSTM--------------------------------------------E 388

  Fly   442 KSYAEYQPDSAQTSDERVQELQAENARLKAQSMRLFQIAFKYIT 485
            ||....| |..:.   ||.||:.|...|:..:..||..:.::||
Human   389 KSVLGGQ-DQLRV---RVTELEDEVRNLRKINRDLFDFSTRFIT 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14805NP_569954.1 WD40 <8..320 CDD:225201 107/315 (34%)
WD40 82..>322 CDD:295369 92/243 (38%)
WD40 repeat 86..121 CDD:293791 13/34 (38%)
WD40 repeat 126..162 CDD:293791 19/37 (51%)
WD40 repeat 172..219 CDD:293791 18/46 (39%)
WD40 repeat 224..270 CDD:293791 10/47 (21%)
WD40 repeat 278..315 CDD:293791 14/36 (39%)
WD40 repeat 319..363 CDD:293791 10/43 (23%)
WDR18NP_001359014.1 WD40 19..297 CDD:392136 98/287 (34%)
WD 1 36..75 10/40 (25%)
WD 2 78..116 15/37 (41%)
WD40 repeat 84..119 CDD:293791 13/34 (38%)
WD 3 119..158 21/38 (55%)
WD40 repeat 124..168 CDD:293791 20/49 (41%)
WD 4 170..211 16/40 (40%)
WD40 repeat 176..211 CDD:293791 14/34 (41%)
Periplasmic_Binding_Protein_type1 212..>430 CDD:385651 66/280 (24%)
WD 5 213..257 10/43 (23%)
WD40 repeat 218..256 CDD:293791 8/37 (22%)
WD 6 267..306 16/40 (40%)
WD40 repeat 272..298 CDD:293791 9/25 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147590
Domainoid 1 1.000 66 1.000 Domainoid score I9984
eggNOG 1 0.900 - - E2759_KOG0646
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32573
Inparanoid 1 1.050 207 1.000 Inparanoid score I3706
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52506
OrthoDB 1 1.010 - - D336315at33208
OrthoFinder 1 1.000 - - FOG0005072
OrthoInspector 1 1.000 - - oto91088
orthoMCL 1 0.900 - - OOG6_103008
Panther 1 1.100 - - LDO PTHR18763
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R615
SonicParanoid 1 1.000 - - X5413
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1514.840

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