DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14805 and wdr18

DIOPT Version :9

Sequence 1:NP_569954.1 Gene:CG14805 / 31146 FlyBaseID:FBgn0023514 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_001005206.1 Gene:wdr18 / 445819 ZFINID:ZDB-GENE-040905-4 Length:431 Species:Danio rerio


Alignment Length:426 Identity:139/426 - (32%)
Similarity:232/426 - (54%) Gaps:20/426 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDAVEALFISTSSEDNTTCSVQDLRTGTDLMRYKGGGCAQHHSLNMIHLNYVMAANSAKPLLHV 65
            |...||.:..:.|:.....|:|.|..||::.:.|:||..:. .||.:::..|::.|...|..::|
Zfish     1 MSAPVEVVLSADSAGQLFNCAVYDPHTGSEFLSYRGGNTSS-RSLTILNGEYILGAQLGKNYINV 64

  Fly    66 WPINKQEQMAGLRFVVPGKVNALALTPDGNFLVAGIQENIYLWHMSSGRMLNTLSKHYQAITCLR 130
            |.|.:::|:. .:.|.||.|..|..:|||.:::|||.|.||||.:|:|.:|..||:|:|.::|::
Zfish    65 WEIQRKDQLQ-QKIVCPGIVTCLCASPDGLYVLAGIAEAIYLWEVSTGNLLAILSRHFQDLSCIK 128

  Fly   131 FTDNGEHFISGGKDGAVLVWDLTFSAAPLDTGGGKDSTEPLYSFNDHGLAVTDLYSGIGGIRSYL 195
            |||:..||:|||||....:|:|: |...||:   ..:.||.:..:.|.|.:||::.|:.|.::.:
Zfish   129 FTDDSSHFVSGGKDNLAFIWNLS-SVVQLDS---SRTPEPRHILSRHSLPITDIHCGLMGPQARV 189

  Fly   196 YTVSLDRCCKVYDLCGGVLLLSVVFPVALHSVIVSKMETRVYVGSSDGKVFVFNM--ENAPRMKE 258
            .|.|||:..||:::..|.:||||:|.|.:.||.....|..::.|.|||.:|..::  .:..|.|.
Zfish   190 ATASLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLFCGGSDGNIFQVSLCSTSLSRDKT 254

  Fly   259 YHLEGEEIQAFVGHTYGKAITCLALNISATTLVSGGEDNQVCVWDVGSRQLIKSLSQKGSVTNLH 323
            :..:.|..|.|.||.  ..:|||::::..|.|:||..|..|.:|||.|:|.|.:::.:|.|||..
Zfish   255 FQSDSEGNQVFKGHR--NLVTCLSVSMDGTVLLSGSNDETVRMWDVQSKQCIWTINHRGPVTNAA 317

  Fly   324 IRLLSPAIFLPEHKQPQMFADSLKRMISPWDENDCIELFDPDYSGGRKTPELDYTQSHPGTDEEI 388
            | :.:||........|.:......|.::|.::.      |...:||........||...||..|.
Zfish   318 I-IPAPANMFLSDSHPAVPLPRFSRHLNPSEQG------DGTGTGGMSLRLGANTQEPEGTYLEK 375

  Fly   389 ILKLIASMSSGKNEDDEGIEAETKATDVEDSEVEEE 424
            ..:|.:.|.:   ..|:.:..:.:.|.|..||:|||
Zfish   376 AEELYSLMCA---VTDKSVFGDGENTKVRVSELEEE 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14805NP_569954.1 WD40 <8..320 CDD:225201 109/313 (35%)
WD40 82..>322 CDD:295369 92/241 (38%)
WD40 repeat 86..121 CDD:293791 16/34 (47%)
WD40 repeat 126..162 CDD:293791 16/35 (46%)
WD40 repeat 172..219 CDD:293791 16/46 (35%)
WD40 repeat 224..270 CDD:293791 12/47 (26%)
WD40 repeat 278..315 CDD:293791 15/36 (42%)
WD40 repeat 319..363 CDD:293791 9/43 (21%)
wdr18NP_001005206.1 WD40 6..320 CDD:225201 114/322 (35%)
WD 1 78..118 19/39 (49%)
WD40 80..>320 CDD:295369 94/246 (38%)
WD40 repeat 84..119 CDD:293791 16/34 (47%)
WD 2 119..158 17/39 (44%)
WD40 repeat 124..169 CDD:293791 18/48 (38%)
WD 3 170..211 14/40 (35%)
WD40 repeat 176..214 CDD:293791 15/37 (41%)
WD 4 213..252 10/38 (26%)
WD40 repeat 218..256 CDD:293791 10/37 (27%)
WD 5 267..306 17/40 (43%)
WD40 repeat 272..298 CDD:293791 10/25 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..363 4/26 (15%)
WD40_alt 383..430 CDD:290784 9/29 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581376
Domainoid 1 1.000 75 1.000 Domainoid score I9054
eggNOG 1 0.900 - - E2759_KOG0646
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32573
Inparanoid 1 1.050 228 1.000 Inparanoid score I3449
OMA 1 1.010 - - QHG52506
OrthoDB 1 1.010 - - D336315at33208
OrthoFinder 1 1.000 - - FOG0005072
OrthoInspector 1 1.000 - - oto40086
orthoMCL 1 0.900 - - OOG6_103008
Panther 1 1.100 - - LDO PTHR18763
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R615
SonicParanoid 1 1.000 - - X5413
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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