DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14805 and Wdr18

DIOPT Version :9

Sequence 1:NP_569954.1 Gene:CG14805 / 31146 FlyBaseID:FBgn0023514 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_780659.2 Gene:Wdr18 / 216156 MGIID:2158400 Length:431 Species:Mus musculus


Alignment Length:489 Identity:139/489 - (28%)
Similarity:235/489 - (48%) Gaps:66/489 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDAVEALFISTSSEDNTTCSVQDLRTGTDLMRYKGGGCAQHHSLNMIHLNYVMAANSAKPLLHV 65
            |...:|.:..:.::....:|.|.:|.:|.:|:.|:||. |....|.:::..|::||...|..:..
Mouse     1 MAAPMEVVVCTDAAAQLWSCVVWELHSGANLLTYRGGQ-AGPRGLALLNGEYLLAAQQGKNYICA 64

  Fly    66 WPINKQEQMAGLRFVVPGKVNALALTPDGNFLVAGIQENIYLWHMSSGRMLNTLSKHYQAITCLR 130
            |.:.:::|:. .:.:.||.|..|...|:|.:::|||.|:||||.:.:|.:|..||:|||.::||:
Mouse    65 WELQRKDQLQ-QKIMCPGPVTCLTTAPNGLYVLAGIAESIYLWEVCTGNLLVILSRHYQDVSCLK 128

  Fly   131 FTDNGEHFISGGKDGAVLVWDL--TFSAAPLDTGGGKDSTEPLYSFNDHGLAVTDLYSGIGGIRS 193
            ||.:|.||:|.|||...|.|.|  ...|.|      .....|.:.::.|.|.:|||:.|.||..:
Mouse   129 FTGDGSHFVSAGKDCLALAWSLCSVLQADP------SRILAPRHVWSQHTLPITDLHCGFGGPMA 187

  Fly   194 YLYTVSLDRCCKVYDLCGGVLLLSVVFPVALHSVIVSKMETRVYVGSSDGKVFVFNMENAPRMKE 258
            .:.|.|||:..|::.:..|.|||||:|.:.:.||.:...|..::.|.|||.:|..::.:.|.::|
Mouse   188 RVATASLDQTVKLWAISSGDLLLSVLFDMGITSVTMDLAEHHIFCGGSDGSIFQVDLCSWPGLRE 252

  Fly   259 YHLEGEEI--QAFVGHTYGKAITCLALNISATTLVSGGEDNQVCVWDVGSRQLIKSLSQKGSVTN 321
            :..:.|:.  :.|.||.  ..:|||:::...:.|:||..|..|.:|||.|:|.:::::.||.|||
Mouse   253 HSFQPEQNTGKVFKGHR--NQVTCLSVSTDGSVLLSGSHDESVRLWDVKSKQCLRTVTLKGPVTN 315

  Fly   322 LHIRLLSPAIFLPEHKQPQMFADSLKRMISPWDENDCIELFDPDYSGGRKTPELDYTQSHPGTDE 386
            ..|.|..|::..||.:.........|.::.       .|..|....||.:               
Mouse   316 AAIILAPPSMLNPEFRPSLPLPHFNKHLLG-------AEHGDEAQGGGLR--------------- 358

  Fly   387 EIILKLIASMSSGKNEDDEGIEAETKATDVEDSEVEEEEPESEPMETASKEAESEKSYAEYQPDS 451
               |:|             |:..:.|    |.|.:|..|.....:          .||.|.....
Mouse   359 ---LQL-------------GLHLQGK----EPSYLERLEQLQAVL----------SSYLEKNMLG 393

  Fly   452 AQTSDERVQELQAENARLKAQSMRLFQIAFKYIT 485
            :|....||.:|:.|...|:..:..||..:.:.||
Mouse   394 SQMLPARVFDLEDEVRSLRKINRDLFDFSTRIIT 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14805NP_569954.1 WD40 <8..320 CDD:225201 103/315 (33%)
WD40 82..>322 CDD:295369 89/243 (37%)
WD40 repeat 86..121 CDD:293791 14/34 (41%)
WD40 repeat 126..162 CDD:293791 16/37 (43%)
WD40 repeat 172..219 CDD:293791 18/46 (39%)
WD40 repeat 224..270 CDD:293791 11/47 (23%)
WD40 repeat 278..315 CDD:293791 13/36 (36%)
WD40 repeat 319..363 CDD:293791 10/43 (23%)
Wdr18NP_780659.2 WD40 <19..314 CDD:225201 103/304 (34%)
WD40 22..297 CDD:295369 95/284 (33%)
WD 1 36..75 10/40 (25%)
WD 2 78..116 16/37 (43%)
WD40 repeat 84..119 CDD:293791 14/34 (41%)
WD 3 119..158 18/38 (47%)
WD40 repeat 124..168 CDD:293791 17/49 (35%)
WD 4 170..211 16/40 (40%)
WD40 repeat 176..213 CDD:293791 16/36 (44%)
WD 5 213..257 11/43 (26%)
WD40 repeat 218..266 CDD:293791 11/47 (23%)
WD 6 267..306 15/40 (38%)
WD40 repeat 272..298 CDD:293791 9/25 (36%)
WD40_alt 383..429 CDD:290784 13/55 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837667
Domainoid 1 1.000 66 1.000 Domainoid score I9981
eggNOG 1 0.900 - - E2759_KOG0646
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32573
Inparanoid 1 1.050 207 1.000 Inparanoid score I3694
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52506
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005072
OrthoInspector 1 1.000 - - oto94673
orthoMCL 1 0.900 - - OOG6_103008
Panther 1 1.100 - - LDO PTHR18763
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R615
SonicParanoid 1 1.000 - - X5413
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

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