DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hao1 and CG18003

DIOPT Version :9

Sequence 1:NP_001101250.1 Gene:Hao1 / 311446 RGDID:1589750 Length:370 Species:Rattus norvegicus
Sequence 2:NP_001027401.1 Gene:CG18003 / 3771779 FlyBaseID:FBgn0061356 Length:366 Species:Drosophila melanogaster


Alignment Length:357 Identity:172/357 - (48%)
Similarity:249/357 - (69%) Gaps:3/357 - (0%)


- Green bases have known domain annotations that are detailed below.


  Rat     5 LVCISDYEQHARTVLQKSVYDYYKSGANDQETLADNIRAFSRWKLYPRMLRNVADIDLSTSVLGQ 69
            |||:.|:|:.|...|:|:..|||:|||.:|.||..|..||.|.:|.||.||:|:.:|:||.:.|:
  Fly     3 LVCVEDFEKKAVGQLEKNALDYYRSGAGEQFTLGLNREAFRRLRLRPRCLRDVSRLDISTKIFGE 67

  Rat    70 RVSMPICVGATAMQCMAHVDGELATVRACQTMGTGMMLSSWATSSIEEVAEAGPEALRWMQLYIY 134
            ::..|:.:..||||.|||.|||:...||....|:..:||:.:|:|:|::|...|:.::|.|||||
  Fly    68 QMQWPLGIAPTAMQKMAHPDGEVGNARAAGKAGSIFILSTLSTTSLEDLAAGAPDTIKWFQLYIY 132

  Rat   135 KDREVSSQLVKRAEQMGYKAIFVTVDTPYLGNRFDDVRNRFKLPPQLRMKNFETNDLAFSPKGNF 199
            |||.::.:||:|||:..:||:.:|:|.|..|:|..||||.|.||..|.:.||:  .:..:..||.
  Fly   133 KDRTITEKLVRRAEKANFKALVLTIDAPIFGHRRADVRNNFSLPSHLSLANFQ--GVKATGVGNA 195

  Rat   200 G-DNSGLAEYVAQAIDPSLSWDDIKWLRRLTSLPIVVKGILRGDDAQEAVKHGVDGILVSNHGAR 263
            . ..||:.|||:...||:::|.||.||:.:|.|||||||:|..:||..|.:.|..|::|||||||
  Fly   196 AMGASGINEYVSSQFDPTITWKDIAWLKGITHLPIVVKGVLTAEDAVLAQEFGCAGLIVSNHGAR 260

  Rat   264 QLDGVPATIDALPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGARAVFVGRPIIWGLAFQGEKG 328
            |:|.|||:|:||||||:||...:.|.||||:.:|.|:.|||||||:.||||||.:||||:.|:||
  Fly   261 QIDTVPASIEALPEIVKAVGDNLVVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKG 325

  Rat   329 VQDVLEILKEEFRLAMALSGCQNVKVIDKTLV 360
            |:::|.:|:::|...|||.||||:..|...:|
  Fly   326 VEEMLSVLRKDFETTMALIGCQNLGDITSAMV 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hao1NP_001101250.1 alpha_hydroxyacid_oxid_FMN 9..357 CDD:239203 168/348 (48%)
FMN_dh 16..362 CDD:279418 166/346 (48%)
CG18003NP_001027401.1 alpha_hydroxyacid_oxid_FMN 7..353 CDD:239203 167/347 (48%)
FMN_dh 17..359 CDD:279418 166/343 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334386
Domainoid 1 1.000 341 1.000 Domainoid score I1052
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6578
Inparanoid 1 1.050 352 1.000 Inparanoid score I2198
OMA 1 1.010 - - QHG54906
OrthoDB 1 1.010 - - D500918at33208
OrthoFinder 1 1.000 - - FOG0001123
OrthoInspector 1 1.000 - - oto95773
orthoMCL 1 0.900 - - OOG6_100930
Panther 1 1.100 - - LDO PTHR10578
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X693
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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