DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps26 and vps26a

DIOPT Version :9

Sequence 1:NP_569952.2 Gene:Vps26 / 31144 FlyBaseID:FBgn0014411 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_957201.1 Gene:vps26a / 393881 ZFINID:ZDB-GENE-040426-1108 Length:327 Species:Danio rerio


Alignment Length:322 Identity:212/322 - (65%)
Similarity:258/322 - (80%) Gaps:4/322 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNFLG--FGQSADIEIVFDGAE-HKTAEVKGEDGKVEKMLLFYDGETVSGKVNVTLKKPGSKLEH 62
            |:|||  ||.:.:|:::.:.|| .||||:|.|:||:||..||||||:||||||:.:|:...:|||
Zfish     1 MSFLGGLFGPACEIDVILNDAESRKTAELKTEEGKLEKHYLFYDGESVSGKVNINVKQTSKRLEH 65

  Fly    63 QGIKIEFIGQIELYYDRGNHHEFKCLAKALARPGDLIQNNSYPFDFPKVEKQFEVYAGSNVRLRY 127
            |||:|||:|||||:.|:.|.|||..|.|.||.||:|.||.||.|:|.:|||.:|.|.|:||||||
Zfish    66 QGIRIEFVGQIELFSDKSNTHEFVNLVKELALPGELTQNRSYDFEFMQVEKPYESYVGANVRLRY 130

  Fly   128 FLRATIVRRISDITKEVDIAVHTLCSYPEMNNPIKMEVGIEDCLHIEFEYNKSKYHLRDTIIGKI 192
            ||:.|||||:||:.||.|:.||.|.:||::||.||||||||||||||||||||||||:|.|:|||
Zfish   131 FLKVTIVRRLSDLVKEYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKI 195

  Fly   193 YFLLVRIKIKHMEIAIIKKESTGTGPTMFNENETIAKYEIMDGAPVKGESIPIRVFLAGYNLTPT 257
            |||||||||:|||:.:||||.||.||:...|.||:||||||:||||||||||||:|||||:||||
Zfish   196 YFLLVRIKIQHMELQLIKKEMTGIGPSTTTETETVAKYEIMEGAPVKGESIPIRLFLAGYDLTPT 260

  Fly   258 MRDINKKFSVKYFLNLVLMDTEDRRYFKQQEITLWRKA-DKPRYHGAQQHQQQQHQHVPLHA 318
            |||:||||||:|||||||:|.|||||||||||.||||| :|.|.....|..:.......|.|
Zfish   261 MRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIVLWRKAPEKMRKRNFHQRYESPEPRPSLSA 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps26NP_569952.2 Vps26 6..280 CDD:146336 187/274 (68%)
vps26aNP_957201.1 Vps26 8..283 CDD:146336 187/274 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..327 3/18 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3063
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53681
OrthoDB 1 1.010 - - D342422at33208
OrthoFinder 1 1.000 - - FOG0001850
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101403
Panther 1 1.100 - - O PTHR12233
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1646
SonicParanoid 1 1.000 - - X1209
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.820

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