DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vps26 and vps26

DIOPT Version :9

Sequence 1:NP_569952.2 Gene:Vps26 / 31144 FlyBaseID:FBgn0014411 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_593695.1 Gene:vps26 / 2543395 PomBaseID:SPAC4G9.13c Length:298 Species:Schizosaccharomyces pombe


Alignment Length:293 Identity:148/293 - (50%)
Similarity:213/293 - (72%) Gaps:2/293 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FGQSADIEIVFDGAEHKT-AEVKGEDGKVEKMLLFYDGETVSGKVNVTLKKPGSKLEHQGIKIEF 69
            |....|:::..|..|.:| .:.:.|.|:.:|..::...|||.|.|.:.| |.|.||:|.|:||||
pombe     5 FKSPIDVDLHLDNEEERTFVDYEFEQGRKDKAPIYESDETVKGTVMIRL-KDGRKLDHDGVKIEF 68

  Fly    70 IGQIELYYDRGNHHEFKCLAKALARPGDLIQNNSYPFDFPKVEKQFEVYAGSNVRLRYFLRATIV 134
            |||||..||:||.|||....:.||.||::.....:.|:|..|:|.:|.|.|.||:|||..|.|:.
pombe    69 IGQIENTYDKGNIHEFTRSVQELASPGEMRHAQMFEFEFKHVDKPYESYIGKNVKLRYICRVTVS 133

  Fly   135 RRISDITKEVDIAVHTLCSYPEMNNPIKMEVGIEDCLHIEFEYNKSKYHLRDTIIGKIYFLLVRI 199
            |::.|:.:|.|:.|:...:.||.|:.|:|:|||::||||||||:|:||||:|.|||||||:||||
pombe   134 RKMKDVIREKDLWVYRFENEPETNSLIRMDVGIDECLHIEFEYSKNKYHLKDVIIGKIYFILVRI 198

  Fly   200 KIKHMEIAIIKKESTGTGPTMFNENETIAKYEIMDGAPVKGESIPIRVFLAGYNLTPTMRDINKK 264
            |::.||::||::|:.||.|..::.:|||.:::||||.|.:||:||:|:||.||.||||.||:|||
pombe   199 KVQRMEVSIIRRETIGTSPNQYSNSETITRFQIMDGNPNRGETIPLRMFLNGYALTPTFRDVNKK 263

  Fly   265 FSVKYFLNLVLMDTEDRRYFKQQEITLWRKADK 297
            |||:|:|:|:|:|.:.||||||.||||||:.|:
pombe   264 FSVRYYLSLILVDEDQRRYFKQSEITLWRRRDE 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps26NP_569952.2 Vps26 6..280 CDD:146336 135/274 (49%)
vps26NP_593695.1 Vps26 5..279 CDD:146336 135/274 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 286 1.000 Domainoid score I289
eggNOG 1 0.900 - - E1_KOG3063
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 316 1.000 Inparanoid score I560
OMA 1 1.010 - - QHG53681
OrthoFinder 1 1.000 - - FOG0001850
OrthoInspector 1 1.000 - - oto101252
orthoMCL 1 0.900 - - OOG6_101403
Panther 1 1.100 - - LDO PTHR12233
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1646
SonicParanoid 1 1.000 - - X1209
TreeFam 1 0.960 - -
1312.860

Return to query results.
Submit another query.