DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgam5 and ytjC

DIOPT Version :10

Sequence 1:NP_569951.1 Gene:Pgam5 / 31143 FlyBaseID:FBgn0023517 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_418812.1 Gene:ytjC / 948918 ECOCYCID:EG12164 Length:215 Species:Escherichia coli


Alignment Length:226 Identity:58/226 - (25%)
Similarity:85/226 - (37%) Gaps:56/226 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 IILVRHG------EYLDVGDSDDTHHLTERGRKQAEFTGKRLCELGIKWDKVVASTMVRAQETSD 147
            :.|||||      |....|.||..  ||.:|.:||.....|..||||  ..:::|.:.|.:.|::
E. coli     4 VYLVRHGETQWNAERRIQGQSDSP--LTAKGEQQAMQVATRAKELGI--THIISSDLGRTRRTAE 64

  Fly   148 IIL-----------------------KQIDFEKEKVVNCAFLREGAPIPPQPPVGHWKPEASQFL 189
            ||.                       :.||...|:..|.........:..:.|.|    |:.|.|
E. coli    65 IIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIPEG----ESMQEL 125

  Fly   190 RDGSRIEAGFRRYFHRAYPDQEKESYTLIVGHGNVIRYFVCRALQFPAEGWLRININHASIT--- 251
            .|  |:.|..     .:..|..:.|..|:|.||..:...|...|..||....|:.:.:.||:   
E. coli   126 SD--RVNAAL-----ESCRDLPQGSRPLLVSHGIALGCLVSTILGLPAWAERRLRLRNCSISRVD 183

  Fly   252 -----WLTISPSGNVSIKYLGDSGFMPAELL 277
                 ||.   ||.| ::..||...:.|..|
E. coli   184 YQESLWLA---SGWV-VETAGDISHLDAPAL 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgam5NP_569951.1 HP <43..278 CDD:472174 58/226 (26%)
ytjCNP_418812.1 PRK03482 1..215 CDD:179583 58/226 (26%)

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