DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgam5 and pgam5

DIOPT Version :10

Sequence 1:NP_569951.1 Gene:Pgam5 / 31143 FlyBaseID:FBgn0023517 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_001007324.2 Gene:pgam5 / 492357 ZFINID:ZDB-GENE-030131-683 Length:289 Species:Danio rerio


Alignment Length:290 Identity:142/290 - (48%)
Similarity:180/290 - (62%) Gaps:19/290 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RKLTSFVCGTGAGLA------------AYYLQRLRDPQTVVQNSWTHSDKPVDPWAL-WDTNWDC 53
            |:..|..||...|.|            .|:.:..|..:|:...:..|  .|..|.|. ||.|||.
Zfish     4 RRALSLACGFAGGSAVLVCAAVVADKNGYFGEGRRVTETLAAVNAAH--PPAWPTANGWDYNWDK 66

  Fly    54 REPRALVRPLRNSQPEEENRYNAELEKAKAKKARHIILVRHGEYLDVGDSDDTHHLTERGRKQAE 118
            |||.::|...|.....|....:||..|.:|  .|||.|:||.:|...||.|....||..||:|||
Zfish    67 REPSSMVNGKRKESTGENGSQDAENNKPRA--TRHIFLIRHSQYNLKGDGDKERFLTPLGREQAE 129

  Fly   119 FTGKRLCELGIKWDKVVASTMVRAQETSDIILKQIDFEKEKVVNCAFLREGAPIPPQPPVGHWKP 183
            |||:||...|:|:|.::.|:|.||.||::||.|.:  ...::|:|..|||||||.|.|||.||||
Zfish   130 FTGQRLASFGLKYDTLIHSSMTRATETANIISKYL--PGVELVSCDLLREGAPIEPVPPVTHWKP 192

  Fly   184 EASQFLRDGSRIEAGFRRYFHRAYPDQEKESYTLIVGHGNVIRYFVCRALQFPAEGWLRININHA 248
            ||.|:..||:||||.||||.|||...|:::||.:||.|.||||||||||||||.|||||:.:|:.
Zfish   193 EAVQYHEDGARIEAAFRRYIHRADAKQKEDSYEIIVCHANVIRYFVCRALQFPPEGWLRLGLNNG 257

  Fly   249 SITWLTISPSGNVSIKYLGDSGFMPAELLT 278
            ||||||:.|||.||::.||||||||.:.||
Zfish   258 SITWLTVRPSGRVSLRALGDSGFMPPDKLT 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgam5NP_569951.1 HP <43..278 CDD:472174 129/235 (55%)
pgam5NP_001007324.2 HP <60..287 CDD:472174 127/230 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..96 8/27 (30%)

Return to query results.
Submit another query.