DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgam5 and Pgam5

DIOPT Version :10

Sequence 1:NP_569951.1 Gene:Pgam5 / 31143 FlyBaseID:FBgn0023517 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_001020443.2 Gene:Pgam5 / 288731 RGDID:1312028 Length:288 Species:Rattus norvegicus


Alignment Length:280 Identity:129/280 - (46%)
Similarity:172/280 - (61%) Gaps:15/280 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CGTGAGLAAYYLQRL----------RDPQTVVQNSWTHSDKPVDPWALWDTNWDCREPRALVRPL 63
            ||...|.||.....:          .|.:|....:||.: :|  ...:||:|||.|||.:|:...
  Rat    12 CGLAGGSAAVLFSAVAVGKPRAGGDADTRTTEPLAWTGA-RP--GHGVWDSNWDRREPLSLINLK 73

  Fly    64 RNSQPEEENRYNAELEKAKAKKARHIILVRHGEYLDVGDSDDTHHLTERGRKQAEFTGKRLCELG 128
            :.:....|:...:.|:..|||..|||.|:||.:|...|..:....||..||:|||.||.||..||
  Rat    74 KRNVESGEDELASRLDHYKAKATRHIFLIRHSQYNVDGSMEKDRTLTPLGREQAELTGIRLASLG 138

  Fly   129 IKWDKVVASTMVRAQETSDIILKQIDFEKEKVVNCAFLREGAPIPPQPPVGHWKPEASQFLRDGS 193
            :|::|:|.|:|.||.||:|||.|.:.....  |:...|||||||.|.|||.||||||.|:..||:
  Rat   139 LKFNKIVHSSMTRAVETTDIISKHLPGVCR--VSTDLLREGAPIEPDPPVSHWKPEAVQYYEDGA 201

  Fly   194 RIEAGFRRYFHRAYPDQEKESYTLIVGHGNVIRYFVCRALQFPAEGWLRININHASITWLTISPS 258
            ||||.||.|.|||...||::||.:.:.|.|||||.||||||||.|||||:::|:.|||.|.|.|:
  Rat   202 RIEAAFRNYIHRADAKQEEDSYEIFICHANVIRYIVCRALQFPPEGWLRLSLNNGSITHLVIRPN 266

  Fly   259 GNVSIKYLGDSGFMPAELLT 278
            |.|:::.|||:||||.:.:|
  Rat   267 GRVALRTLGDTGFMPPDKIT 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgam5NP_569951.1 HP <43..278 CDD:472174 118/234 (50%)
Pgam5NP_001020443.2 None

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