back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Pgam5 and Bpgm

DIOPT Version :9

Sequence 1:	NP_569951.1	Gene:	Pgam5 / 31143	FlyBaseID:	FBgn0023517	Length:	289	Species:	Drosophila melanogaster
Sequence 2:	NP_031589.1	Gene:	Bpgm / 12183	MGIID:	1098242	Length:	259	Species:	Mus musculus

Alignment Length:	258	Identity:	51/258 - (19%)
Similarity:	84/258 - (32%)	Gaps:	101/258 - (39%)

- Green bases have known domain annotations that are detailed below.

  Fly    86 ARH-IILVRHGE-----------YLDVGDSDDTHHLTERGRKQAEFTGKRLCELGIKWDKVVAST 138
            ::| :|::||||           ::|       ..|...|.::|...|::|..|..::|.|..|.
Mouse     2 SKHKLIILRHGEGQWNKENRFCSWVD-------QKLNNDGLEEARNCGRQLKALNFEFDLVFTSI 59

  Fly   139 MVRAQETSDIILKQ----------------------IDFEKEKVV------NCAFLREGAPIPPQ 175
            :.|:..|:.:||::                      |...:||:.      .....|....:.|
Mouse    60 LNRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREKMALNHGEEQVRLWRRSYNVTP- 123

  Fly   176 PPVGHWKPEASQFLRDGSRIEAGFRRYFHRAYPDQEKESYTLIVGHGNVIRYFVCRAL--QFPAE 238
            ||:....|                  |||..|.|:               ||.||...  |.|..
Mouse   124 PPIEESHP------------------YFHEIYSDR---------------RYKVCDVPLDQLPRS 155

  Fly   239 GWLRININHASITW-------------LTISPSGNVS---IKYLGDSGFMPAELLTNRIPRDV 285
            ..|:..:......|             :.||..||.|   :|:|  .|....:::...:|..|
Mouse   156 ESLKDVLERLLPYWKERIAPEILKGKSILISAHGNSSRALLKHL--EGISDEDIINITLPTGV 216

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.