DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex5 and PEX5

DIOPT Version :9

Sequence 1:NP_726771.1 Gene:Pex5 / 31141 FlyBaseID:FBgn0023516 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_200440.1 Gene:PEX5 / 835728 AraportID:AT5G56290 Length:728 Species:Arabidopsis thaliana


Alignment Length:635 Identity:185/635 - (29%)
Similarity:281/635 - (44%) Gaps:134/635 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VEGDCGGV----NPLMQLG-GQFTRDVAHKDEGYVQRHFERAARPEDQLINEFLGQVTAPPQSFQ 121
            ||...||:    .|:..|| .|..:.........:.|||  .|...::.||   .||.|...|..
plant   142 VESSRGGIPFRPAPVPVLGLSQSDKQCIRDRSSIMARHF--FADRGEEFIN---SQVNALLSSLD 201

  Fly   122 MDTLLQ-------EMRDINIHGNPQQQM---HSQQAEQWGQDF-ARGLAPALPNKMIHMQAQQQD 175
            :|..:|       ..|:::.:.|..|.:   :...|:.|..:| ..|:....|:..:....||..
plant   202 IDDGIQARGHVPGRFRELDDYWNESQAVVKPNLHPADNWAAEFNQHGMDHGGPDSWVQSFEQQHG 266

  Fly   176 LQHAQEFFDE---PLISSQNFRSLPPLRQPLMPIAAGQQ---------QD--PFFDSAM------ 220
            :......|::   .|:||| .||:     .:..|||.:|         ||  |.|.::.      
plant   267 VNGWATEFEQGQSQLMSSQ-MRSM-----DMQNIAAMEQTRKLAHTLSQDGNPKFQNSRFLQFVS 325

  Fly   221 -----ETIITDHLPQAPQGESLDDWISDYQRSTEQKEQTAANF-NEKF------W---------- 263
                 |.||.::  |..|..:..:|.::|::........|..| |||.      |          
plant   326 KMSRGELIIDEN--QVKQASAPGEWATEYEQQYLGPPSWADQFANEKLSHGPEQWADEFASGRGQ 388

  Fly   264 -ERLQDEW-QKLADENEHPWLSEYNDN----------MDAYKE--------------YEFAEGNP 302
             |..:|:| .:.:..|...|:.|:.:.          .:||.|              |.|::.||
plant   389 QETAEDQWVNEFSKLNVDDWIDEFAEGPVGDSSADAWANAYDEFLNEKNAGKQTSGVYVFSDMNP 453

  Fly   303 MSDVENPFEKGKEYLSKGDIPSAVLCFEVAAKKQPERAEVWQLLGTSQTENEMDPQAIAALKRAY 367
            ......|.::|:|...||.:..|.|..|....|.||.||.|:|||.:..||:.|.|||||:.||.
plant   454 YVGHPEPMKEGQELFRKGLLSEAALALEAEVMKNPENAEGWRLLGVTHAENDDDQQAIAAMMRAQ 518

  Fly   368 DLQPDNQQVLMALAACYTNEGLQNNAVRMLCNWLTVHPKYQHLVAAHPELQAEGTSLASSLIGPS 432
            :..|.|.:||:||...:|||..|..|::.|..||..||||..:  |.||       ||.||..  
plant   519 EADPTNLEVLLALGVSHTNELEQATALKYLYGWLRNHPKYGAI--APPE-------LADSLYH-- 572

  Fly   433 KLRDLQQIYLEAVRQHPSEVDAEVQDALGVLYNLSGEFDKAVDCYQSALQVDPQNAKTWNRLGAS 497
              .|:.:::.||.:.:|.  ||:|...||||||||.|||:|:..:|:|||:.|.:...||:|||:
plant   573 --ADIARLFNEASQLNPE--DADVHIVLGVLYNLSREFDRAITSFQTALQLKPNDYSLWNKLGAT 633

  Fly   498 LANGSRSVEAVEAYQQALQLQPGFIRVRYNVGVCCMNLKAYKEAVEHLLTALTMQAHTNAARELP 562
            .||..:|.:|:.||||||.|:|.::|...|:|:...|...|||::.:.:.||.|           
plant   634 QANSVQSADAISAYQQALDLKPNYVRAWANMGISYANQGMYKESIPYYVRALAM----------- 687

  Fly   563 NAAMAATFRGQNQMSESIWSTLKMVISLMGRSDLQSYVSDRNLAALNEAF 612
                       |..:::.|..|::.:|...|.|:......|||..|.:.|
plant   688 -----------NPKADNAWQYLRLSLSCASRQDMIEACESRNLDLLQKEF 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex5NP_726771.1 TPR_11 310..371 CDD:290150 26/60 (43%)
TPR repeat 310..334 CDD:276809 7/23 (30%)
TPR repeat 339..369 CDD:276809 16/29 (55%)
TPR repeat 374..397 CDD:276809 9/22 (41%)
TPR_11 453..519 CDD:290150 36/65 (55%)
TPR repeat 454..482 CDD:276809 16/27 (59%)
TPR_1 460..487 CDD:278916 17/26 (65%)
TPR repeat 487..517 CDD:276809 15/29 (52%)
TPR_1 488..521 CDD:278916 17/32 (53%)
TPR_16 493..549 CDD:290168 22/55 (40%)
TPR repeat 522..549 CDD:276809 7/26 (27%)
PEX5NP_200440.1 TPR 472..726 CDD:223533 108/290 (37%)
TPR repeat 490..520 CDD:276809 16/29 (55%)
TPR repeat 525..548 CDD:276809 9/22 (41%)
TPR_1 590..623 CDD:278916 19/32 (59%)
TPR repeat 590..618 CDD:276809 16/27 (59%)
TPR repeat 623..653 CDD:276809 15/29 (52%)
TPR_1 658..690 CDD:278916 11/53 (21%)
TPR repeat 658..686 CDD:276809 8/27 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1125
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 204 1.000 Inparanoid score I1292
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D588648at2759
OrthoFinder 1 1.000 - - FOG0001469
OrthoInspector 1 1.000 - - oto3697
orthoMCL 1 0.900 - - OOG6_101647
Panther 1 1.100 - - LDO PTHR10130
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1034
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.830

Return to query results.
Submit another query.