DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex5 and Pex5l

DIOPT Version :9

Sequence 1:NP_726771.1 Gene:Pex5 / 31141 FlyBaseID:FBgn0023516 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_011247990.1 Gene:Pex5l / 58869 MGIID:1916672 Length:673 Species:Mus musculus


Alignment Length:608 Identity:195/608 - (32%)
Similarity:308/608 - (50%) Gaps:95/608 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LCNT----VTKPIASITADKQLRSISTSNTMSFRPLVEGDCGGVNPLMQLGGQFTRDVAHKDEGY 90
            ||.|    :.||:.|.||      :.|:. :....|.|       |:.|     |:..|.|.|..
Mouse   132 LCETKSEAIAKPVTSNTA------VLTTG-LDLLDLSE-------PVSQ-----TQTKAKKSEPS 177

  Fly    91 VQRHFERAARPEDQLIN---EFLGQVTAPPQSFQMD-----TLLQEMRDINIHGNPQQQMHSQQA 147
            .:....:.......||:   |...|....|::..:|     |.|::..|:..||:...:.| ..|
Mouse   178 SKSSSLKKKADGSDLISADAEQRAQALRGPETSSLDLVDIQTQLEKWDDVKFHGDRTSKGH-LMA 241

  Fly   148 EQWGQDFARGLAPALPNKMIHMQAQQQDLQHAQEFFDEPLI----SSQNFRSLPPLRQPLMPIAA 208
            |:               |....:...::|..:.|...:|.:    |:.|..|...| :.:.|..|
Mouse   242 ER---------------KSCSSRTGSKELLWSAEHRSQPELSTGKSALNSESASEL-ELVAPAQA 290

  Fly   209 GQQQDPFFDSAMETIITDHLPQAPQGESLDDWISDYQRSTEQKEQTAANFNEKFWERLQDEWQKL 273
            ...::..:.||:          ..:..||::   :::|:     :.|...:.:||:::|.||:::
Mouse   291 RLTKEHRWGSAL----------LSRNHSLEE---EFERA-----KAAVESDTEFWDKMQAEWEEM 337

  Fly   274 ADENEHPWLSEYNDNMDAY---------KEYEFAEGNPMSDVENPFEKGKEYLSKGDIPSAVLCF 329
            |..|   |:||   |.:|.         |.|.|...||..|....||:|.:.|.:||:|..:|..
Mouse   338 ARRN---WISE---NQEAQNQVTVSASEKGYYFHTENPFKDWPGAFEEGLKRLKEGDLPVTILFM 396

  Fly   330 EVAAKKQPERAEVWQLLGTSQTENEMDPQAIAALKRAYDLQPDNQQVLMALAACYTNEGLQNNAV 394
            |.|..:.|..||.||.||.:|.|||.:..||.||:|..:|||:|.:.|||||..|||...|.:|.
Mouse   397 EAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDAC 461

  Fly   395 RMLCNWLTVHPKYQHLVAAHPELQAEGTSLASSLIGPSKLRDLQQIYLEAVRQHPSEVDAEVQDA 459
            ..|.||:..:|||::||............::.|.:..|.|..::::||||..|:...:|.::|..
Mouse   462 EALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTG 526

  Fly   460 LGVLYNLSGEFDKAVDCYQSALQVDPQNAKTWNRLGASLANGSRSVEAVEAYQQALQLQPGFIRV 524
            ||||::|||||::|:|.:.:||.|.|::...||||||:||||.||.||||||.:||::||||||.
Mouse   527 LGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRS 591

  Fly   525 RYNVGVCCMNLKAYKEAVEHLLTALTMQAHTNAARELPNAAMAATFRGQNQMSESIWSTLKMVIS 589
            |||:|:.|:||.||:|||.:.||||::|..:...:::|:.|          :|.:||:.|::.:|
Mouse   592 RYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPA----------ISGNIWAALRIALS 646

  Fly   590 LMGRSDLQSYVSDRNLAALNEAF 612
            ||.:.:|....:..:|..|..||
Mouse   647 LMDQPELFQAANLGDLDVLLRAF 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex5NP_726771.1 TPR_11 310..371 CDD:290150 27/60 (45%)
TPR repeat 310..334 CDD:276809 10/23 (43%)
TPR repeat 339..369 CDD:276809 15/29 (52%)
TPR repeat 374..397 CDD:276809 10/22 (45%)
TPR_11 453..519 CDD:290150 37/65 (57%)
TPR repeat 454..482 CDD:276809 13/27 (48%)
TPR_1 460..487 CDD:278916 15/26 (58%)
TPR repeat 487..517 CDD:276809 20/29 (69%)
TPR_1 488..521 CDD:278916 22/32 (69%)
TPR_16 493..549 CDD:290168 38/55 (69%)
TPR repeat 522..549 CDD:276809 16/26 (62%)
Pex5lXP_011247990.1 TPR repeat 377..401 CDD:276809 10/23 (43%)
PEP_TPR_lipo <384..621 CDD:274350 113/236 (48%)
TPR repeat 406..436 CDD:276809 15/29 (52%)
TPR repeat 441..469 CDD:276809 13/27 (48%)
TPR repeat 521..549 CDD:276809 13/27 (48%)
TPR repeat 554..584 CDD:276809 20/29 (69%)
TPR repeat 589..617 CDD:276809 17/27 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848219
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1125
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001469
OrthoInspector 1 1.000 - - otm42786
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10130
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1034
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.800

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