DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex5 and Pex5

DIOPT Version :9

Sequence 1:NP_726771.1 Gene:Pex5 / 31141 FlyBaseID:FBgn0023516 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_006237446.1 Gene:Pex5 / 312703 RGDID:1307612 Length:641 Species:Rattus norvegicus


Alignment Length:661 Identity:244/661 - (36%)
Similarity:347/661 - (52%) Gaps:128/661 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 MSFRPLVEGDCGGVNPLMQLGGQFTRDVAHKDEGYVQRHF-------ERAARP-----EDQLINE 108
            |:.|.|||.:|||.||||:|...||:|.|.:.||.....:       |..::|     ||:|:.|
  Rat     1 MAMRELVESECGGANPLMKLATHFTQDKALRQEGLRPGPWPPGASAAETVSKPLGVGTEDELVAE 65

  Fly   109 FLGQ-----VTAPPQSFQMDTLLQEMRDI---NIHGNPQQQ---MHSQQAEQWGQDF-ARG---- 157
            ||..     |:..||:|:||.||.||::|   |....||:.   .....:|.|.|:| |.|    
  Rat    66 FLQDQNATLVSRAPQTFKMDDLLAEMQEIEQSNFRQAPQRAPGVADLALSENWAQEFLAAGDAVD 130

  Fly   158 -----------------------LAPALPNKMIHMQAQ-----------------------QQDL 176
                                   ::||...:....|::                       ::||
  Rat   131 VAQDYNETDWSQEFIAEVTDPLSVSPARWAEEYLEQSEEKLWLGDPEGTSTTDRWYDEYHPEEDL 195

  Fly   177 QHAQEFF----DEPLISSQNFRSLPPLRQPLMPIAAGQQQDPFFDSA-------METIITDHLPQ 230
            ||....|    |:|.:::..|  |..:||    |..||..   .:||       .|....:.:.|
  Rat   196 QHTASDFVSKVDDPKLANSEF--LKFVRQ----IGEGQVS---LESAAGSGRAQAEQWAAEFIQQ 251

  Fly   231 APQGESLDDWISDYQRSTE---------QKEQTAANFNEKFWERLQDEWQKLA--DENEHPWLSE 284
              ||.| :.|:..:.|...         ::.::|...:..||::||.|.:::|  |...|||||:
  Rat   252 --QGTS-EAWVDQFTRPGNKLAALQVEFERAKSAIESDVDFWDKLQAELEEMAKRDAEAHPWLSD 313

  Fly   285 YNDNMDAY--KEYEFAEGNPMSDVENPFEKGKEYLSKGDIPSAVLCFEVAAKKQPERAEVWQLLG 347
            |:|...|.  |.|:|.|.||:.|...|||:|...|.:||:|:|||.||.|.::.|:..|.||.||
  Rat   314 YDDLTSASYDKGYQFEEENPLRDHPQPFEEGLRRLEEGDLPNAVLLFEAAVQQDPKHMEAWQYLG 378

  Fly   348 TSQTENEMDPQAIAALKRAYDLQPDNQQVLMALAACYTNEGLQNNAVRMLCNWLTVHPKYQHLVA 412
            |:|.|||.:..||:||:|..:|:|||:..|||||..:|||.||..|...|.:||...|.|.||||
  Rat   379 TTQAENEQELLAISALRRCLELKPDNRTALMALAVSFTNESLQRQACETLRDWLRYSPAYAHLVA 443

  Fly   413 AHPELQAEGTSLA------SSLIGPSKLRDLQQIYLEAVRQHPSEVDAEVQDALGVLYNLSGEFD 471
            ...| .|.|..|.      .||:..|...::::::|.|||..|:.:|.:||..||||:|||||:|
  Rat   444 PGEE-GASGAGLGPSKRVLGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYD 507

  Fly   472 KAVDCYQSALQVDPQNAKTWNRLGASLANGSRSVEAVEAYQQALQLQPGFIRVRYNVGVCCMNLK 536
            |||||:.:||.|.|.:...||:|||:||||::|.|||.||::||:||||:||.|||:|:.|:||.
  Rat   508 KAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLG 572

  Fly   537 AYKEAVEHLLTALTMQAHTNAARELPNAAMAATFRGQNQMSESIWSTLKMVISLMGRSDLQSYVS 601
            |::|||||.|.||.||..:...|....|           |||:|||||::.:|::|:||......
  Rat   573 AHREAVEHFLEALNMQRKSRGPRGEGGA-----------MSENIWSTLRLALSMLGQSDAYGAAD 626

  Fly   602 DRNLAALNEAF 612
            .|:|.||...|
  Rat   627 ARDLPALLTMF 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex5NP_726771.1 TPR_11 310..371 CDD:290150 30/60 (50%)
TPR repeat 310..334 CDD:276809 13/23 (57%)
TPR repeat 339..369 CDD:276809 15/29 (52%)
TPR repeat 374..397 CDD:276809 11/22 (50%)
TPR_11 453..519 CDD:290150 40/65 (62%)
TPR repeat 454..482 CDD:276809 18/27 (67%)
TPR_1 460..487 CDD:278916 19/26 (73%)
TPR repeat 487..517 CDD:276809 17/29 (59%)
TPR_1 488..521 CDD:278916 20/32 (63%)
TPR_16 493..549 CDD:290168 35/55 (64%)
TPR repeat 522..549 CDD:276809 16/26 (62%)
Pex5XP_006237446.1 PRY 307..>342 CDD:295431 18/34 (53%)
TPR_11 341..402 CDD:290150 22/66 (33%)
TPR repeat 341..365 CDD:276809 10/23 (43%)
TPR repeat 370..400 CDD:276809 9/35 (26%)
TPR repeat 405..433 CDD:276809 19/27 (70%)
TPR_11 489..555 CDD:290150 24/65 (37%)
TPR_1 490..523 CDD:278916 8/32 (25%)
TPR repeat 490..518 CDD:276809 7/27 (26%)
TPR repeat 523..553 CDD:276809 12/29 (41%)
TPR_11 525..587 CDD:290150 14/33 (42%)
TPR_1 527..557 CDD:278916 11/29 (38%)
TPR repeat 558..585 CDD:276809 244/661 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351797
Domainoid 1 1.000 86 1.000 Domainoid score I7948
eggNOG 1 0.900 - - E1_KOG1125
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H270
Inparanoid 1 1.050 353 1.000 Inparanoid score I2187
OMA 1 1.010 - - QHG54982
OrthoDB 1 1.010 - - D284122at33208
OrthoFinder 1 1.000 - - FOG0001469
OrthoInspector 1 1.000 - - otm44848
orthoMCL 1 0.900 - - OOG6_101647
Panther 1 1.100 - - LDO PTHR10130
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1034
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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