DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex5 and prx-5

DIOPT Version :9

Sequence 1:NP_726771.1 Gene:Pex5 / 31141 FlyBaseID:FBgn0023516 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001022019.1 Gene:prx-5 / 174392 WormBaseID:WBGene00004194 Length:502 Species:Caenorhabditis elegans


Alignment Length:571 Identity:163/571 - (28%)
Similarity:259/571 - (45%) Gaps:100/571 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LVEGDCGGVNPLMQLGGQFTRDVAHKDEGYVQRHFERAARPEDQLINEFLGQV--TAPPQSFQMD 123
            :|||.||..|.|:.|...|..................::...:|:.||||.|.  |..|.||.|.
 Worm     4 VVEGQCGQQNALVGLANTFGTSNQRVAPSNAAASLLPSSSMGEQMANEFLRQQARTMAPTSFSMK 68

  Fly   124 TLLQEMRDINIHGNPQQQMHSQQAEQWGQDFARGLAPALPNKMIHMQAQQQDLQHAQEFFDEPLI 188
            ::...:        ||....|..|..|.::|               |.:|..|  |.::      
 Worm    69 SMQNNL--------PQASASSSLAANWTKEF---------------QPRQNQL--ASQW------ 102

  Fly   189 SSQNFRSLPPLRQPLMPIAAGQQQDPFFDSAMETIITDHLPQAPQGESLDDWISDYQRSTE---Q 250
             ||.:.|    ..|.|..|..|.|.|...|.     :.|.|....|.    |.|:|..:.:   .
 Worm   103 -SQQYTS----SAPSMESAWRQVQAPSMTST-----SSHQPITDAGM----WSSEYLDTVDTSLT 153

  Fly   251 KEQTAANFNEKFWER-----LQDEWQKLADENEHPWLS-----EYNDNMDAYKEYEFAEGNPMSD 305
            |.....|:.:.|.|:     :::.| |.|...|..|..     |.::::.:.:.|.:.|.||.:.
 Worm   154 KSSGTQNWADDFMEQQDNYGMENTW-KDAQAFEQRWEEIKRDMEKDESLQSPENYVYQEANPFTT 217

  Fly   306 VENPFEKGKEYLSKGDIPSAVLCFEVAAKKQPERAEVWQLLGTSQTENEMDPQAIAALKRAYDLQ 370
            :.:|..:|...:..|||.:|:|.:|.|.:|.|:.|..|..||.:..|||.|..|:.|.::...:.
 Worm   218 MSDPLMEGDNLMRNGDIGNAMLAYEAAVQKDPQDARAWCKLGLAHAENEKDQLAMQAFQKCLQID 282

  Fly   371 PDNQQVLMALAACYTNEGLQNNAVRMLCNWLTVHPKYQHLVAAHPELQAEGTS------LASSLI 429
            ..|::.|:.|:....|||::|.|:..|..|::.:            |.:..|.      |.||.:
 Worm   283 AGNKEALLGLSVSQANEGMENEALHQLDKWMSSY------------LGSNSTQVTTTPPLYSSFL 335

  Fly   430 GPSKLRDLQQIYLEAVRQHPSEVDAEVQDALGVLYNLSGEFDKAVDCYQSALQVDPQNAKTWNRL 494
            .......::..:|:|.||..:..|.::|:||||||||:..|.:|||..:.|:..:|.:|:.||||
 Worm   336 DSDTFNRVEARFLDAARQQGATPDPDLQNALGVLYNLNRNFARAVDSLKLAISKNPTDARLWNRL 400

  Fly   495 GASLANGSRSVEAVEAYQQALQLQPGFIRVRYNVGVCCMNLKAYKEAVEHLLTALTMQAHTNAAR 559
            ||:||||..:.||:.||::||:|.|.::|.|||:|:.||.|.:|.||::|.|:||.:|       
 Worm   401 GATLANGDHTAEAISAYREALKLYPTYVRARYNLGISCMQLSSYDEALKHFLSALELQ------- 458

  Fly   560 ELPNAAMAATFRGQNQMSESIWSTLKMVISLMGR--SDLQSYVSDRNLAAL 608
                       :|.|..| .||:|::........  .:|...|..|:|||:
 Worm   459 -----------KGGNDAS-GIWTTMRSAAIRTSNVPDNLLRAVERRDLAAV 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex5NP_726771.1 TPR_11 310..371 CDD:290150 20/60 (33%)
TPR repeat 310..334 CDD:276809 8/23 (35%)
TPR repeat 339..369 CDD:276809 10/29 (34%)
TPR repeat 374..397 CDD:276809 7/22 (32%)
TPR_11 453..519 CDD:290150 34/65 (52%)
TPR repeat 454..482 CDD:276809 14/27 (52%)
TPR_1 460..487 CDD:278916 13/26 (50%)
TPR repeat 487..517 CDD:276809 17/29 (59%)
TPR_1 488..521 CDD:278916 19/32 (59%)
TPR_16 493..549 CDD:290168 29/55 (53%)
TPR repeat 522..549 CDD:276809 13/26 (50%)
prx-5NP_001022019.1 TPR 181..455 CDD:223533 96/285 (34%)
TPR repeat 222..246 CDD:276809 8/23 (35%)
TPR repeat 251..281 CDD:276809 10/29 (34%)
TPR repeat 286..314 CDD:276809 9/27 (33%)
TadD <355..>462 CDD:227343 52/124 (42%)
TPR repeat 360..388 CDD:276809 14/27 (52%)
TPR repeat 393..423 CDD:276809 17/29 (59%)
TPR repeat 428..456 CDD:276809 14/27 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166891
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H270
Inparanoid 1 1.050 220 1.000 Inparanoid score I2290
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D284122at33208
OrthoFinder 1 1.000 - - FOG0001469
OrthoInspector 1 1.000 - - oto20481
orthoMCL 1 0.900 - - OOG6_101647
Panther 1 1.100 - - LDO PTHR10130
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2359
SonicParanoid 1 1.000 - - X1034
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.930

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