DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex5 and pex5lb

DIOPT Version :9

Sequence 1:NP_726771.1 Gene:Pex5 / 31141 FlyBaseID:FBgn0023516 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_009297427.1 Gene:pex5lb / 100332270 ZFINID:ZDB-GENE-111221-1 Length:604 Species:Danio rerio


Alignment Length:558 Identity:182/558 - (32%)
Similarity:281/558 - (50%) Gaps:93/558 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 KDEGYVQRHFERAARPEDQLINEFLGQV-TAP-------PQSFQMDTL----LQEMRDINIHGNP 138
            :..|:.:....:....|.:||     || |.|       |:...:|::    |.:..::::|  |
Zfish   105 RKNGFSKSSLRKKKTEETELI-----QVETEPSSPSRSNPERASLDSVSSSPLDKWEEVSLH--P 162

  Fly   139 QQQMHSQQAEQWGQDFARGLAPALPNKMIHMQAQQQDLQHAQEFFDEPLISSQNFRSLPPLRQPL 203
            ...::.  ..:|..:..|..:                 .|:    ...|:.|.:|::....|...
Zfish   163 DSALNG--GRKWRYERKRCTS-----------------NHS----SSELLWSADFKTDFSNRHSA 204

  Fly   204 MPIAAGQQQDPFFDSAMETIITDHLPQAPQGE--SLDDWISDYQRSTEQ---KEQTAANFNEKFW 263
            :.::...:.||              ..|||.:  .|...:...|.|.|:   :.:.|...:.:||
Zfish   205 LELSISTESDP--------------GPAPQRQKPQLGGSLLGRQHSLEEEFVRAKAAVESDTEFW 255

  Fly   264 ERLQDEWQKLADENEHPWLSEYNDN-------MDAYKEYEFAEGNPMSDVENPFEKGKEYLSKGD 321
            :::|.||::||..|   ||.:.:..       ....|.|.|...||..|..|.||:|::....||
Zfish   256 DKMQAEWEELARRN---WLEDADSEGLVPLNFSPTEKGYFFHANNPYKDYSNAFEQGQQKCRDGD 317

  Fly   322 IPSAVLCFEVAAKKQPERAEVWQLLGTSQTENEMDPQAIAALKRAYDLQPDNQQVLMALAACYTN 386
            :.||||..|.|..:.|:.:|.||:|||:|.|||.:..||..|:|..:|.|:|.:.|||||...||
Zfish   318 LNSAVLLLEAAILQDPQDSEAWQVLGTTQAENENEQAAIVCLQRCLELHPNNLKALMALAVSLTN 382

  Fly   387 EGLQNNAVRMLCNWLTVHPKYQHLVA------AHPELQAEGTSLAS-SLIGPSKLRDLQQIYLEA 444
            .|.|..|...|..|:..:|:|.||:.      ..|..:..|:|::. |.:|.|:|.::.::|.||
Zfish   383 TGQQPEACEALHRWIRYNPRYSHLLQDRSPLDGSPLPRRRGSSISRISTLGCSQLVEVLELYQEA 447

  Fly   445 VRQHPSEVDAEVQDALGVLYNLSGEFDKAVDCYQSALQVDPQNAKTWNRLGASLANGSRSVEAVE 509
            |:.:..|||.::|..||||:|||.||||||..:.:||.:.|::...||||||:||||.||.||||
Zfish   448 VQLNTEEVDPDLQTGLGVLFNLSSEFDKAVIAFNAALSIRPEDYLLWNRLGATLANGDRSEEAVE 512

  Fly   510 AYQQALQLQPGFIRVRYNVGVCCMNLKAYKEAVEHLLTALTMQAHTNAARELPNAAMAATFRGQN 574
            ||.:||:|||||||.|||:|:.|:||.|::|||.:.||||..|..:               |...
Zfish   513 AYTRALELQPGFIRSRYNLGISCINLGAHREAVSNFLTALHQQRKS---------------RSHK 562

  Fly   575 QMSESIWSTLKMVISLMGRSDLQSYVSDRNLAALNEAF 612
            .||.:||:.|::.:||||:.:|....|..:|..|.:||
Zfish   563 VMSSNIWAALRIALSLMGQPELFQAASVGDLDLLMKAF 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex5NP_726771.1 TPR_11 310..371 CDD:290150 27/60 (45%)
TPR repeat 310..334 CDD:276809 11/23 (48%)
TPR repeat 339..369 CDD:276809 14/29 (48%)
TPR repeat 374..397 CDD:276809 10/22 (45%)
TPR_11 453..519 CDD:290150 39/65 (60%)
TPR repeat 454..482 CDD:276809 15/27 (56%)
TPR_1 460..487 CDD:278916 16/26 (62%)
TPR repeat 487..517 CDD:276809 20/29 (69%)
TPR_1 488..521 CDD:278916 23/32 (72%)
TPR_16 493..549 CDD:290168 38/55 (69%)
TPR repeat 522..549 CDD:276809 15/26 (58%)
pex5lbXP_009297427.1 TPR_11 335..401 CDD:290150 29/65 (45%)
TPR repeat 335..365 CDD:276809 14/29 (48%)
TPR_1 336..369 CDD:278916 16/32 (50%)
TPR repeat 370..398 CDD:276809 12/27 (44%)
TPR_11 456..522 CDD:290150 39/65 (60%)
TPR repeat 457..485 CDD:276809 15/27 (56%)
TPR repeat 490..520 CDD:276809 20/29 (69%)
TPR_11 492..553 CDD:290150 41/60 (68%)
TPR_1 494..524 CDD:278916 23/29 (79%)
TPR repeat 525..552 CDD:276809 15/26 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D284122at33208
OrthoFinder 1 1.000 - - FOG0001469
OrthoInspector 1 1.000 - - otm25115
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10130
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1034
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
77.020

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