DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED18 and AT2G22370

DIOPT Version :10

Sequence 1:NP_569948.3 Gene:MED18 / 31140 FlyBaseID:FBgn0026873 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_565534.1 Gene:AT2G22370 / 816769 AraportID:AT2G22370 Length:219 Species:Arabidopsis thaliana


Alignment Length:215 Identity:56/215 - (26%)
Similarity:84/215 - (39%) Gaps:53/215 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NLEYLLQGSILDSAVEHLMHRLKGLCDNVDTSPEPFHDLEVCMSLRQ-PNANQPLLLRVRRALGR 85
            ::|.::||.|....||.|...|:|||   ....|.....|:|  ||. ||.. .:...||.....
plant     2 SMECVVQGIIETQHVEALEILLQGLC---GVQRERLRVHELC--LRSGPNLG-VVSSEVRLLCDL 60

  Fly    86 DAP----------FQMRYLGNPEVDLRRPTLVRSCMDCACTNGILEFLTEMGFRLEFEYIAKGYM 140
            |.|          ..||..|..::.:    |||:.::...:...|.....:|::|:.|.:..|:.
plant    61 DQPEPTWTVKHVGGAMRGAGADQISV----LVRNMIESKVSKNALRMFYALGYKLDHELLKVGFA 121

  Fly   141 F---RKGRMKITVSKL------------IKIVPGKQQDMANEPISQSYIVELSVVAPTGQENVGE 190
            |   |...:.::||.:            :.:.||.|            ||:  |.||...||..|
plant   122 FHFQRTAHISVSVSSVNKMPKVHAIDEAVPVTPGMQ------------IVD--VTAPATSENYSE 172

  Fly   191 ---EMRVFAEQLKPLVQLEK 207
               .:..|.|.|.|||.|.|
plant   173 VAAAVSSFCEFLAPLVHLSK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED18NP_569948.3 Med18 24..209 CDD:462845 56/213 (26%)
AT2G22370NP_565534.1 None

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