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Protein Alignment MED18 and med18
DIOPT Version :9
| Sequence 1: | NP_569948.3 |
Gene: | MED18 / 31140 |
FlyBaseID: | FBgn0026873 |
Length: | 217 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001017086.1 |
Gene: | med18 / 549840 |
XenbaseID: | XB-GENE-1002158 |
Length: | 208 |
Species: | Xenopus tropicalis |
| Alignment Length: | 193 |
Identity: | 105/193 - (54%) |
| Similarity: | 141/193 - (73%) |
Gaps: | 6/193 - (3%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 23 LEYLLQGSILDSAVEHLMHRLKGLCDNVDTSPEPFHDLEVCMSLRQPNANQPLLLRVRRALGR-D 86
:||||||||||..:|.|:|||:|||||:: ||.|.|.|....|:...|: |.:||.||.|.| .
Frog 19 MEYLLQGSILDQGLESLLHRLRGLCDNME--PETFADHESVYLLKGQQAS-PFVLRARRPLDRPG 80
Fly 87 APFQMRYLGNPEV-DLRRPTLVRSCMDCACTNGILEFLTEMGFRLEFEYIAKGYMFRKGRMKITV 150
||:.:||||.||. |..|.||||:|:|.|.::.:.|||.|||||::.|::|:|::||||.||:.|
Frog 81 APWHLRYLGQPEAGDRSRHTLVRNCVDIATSDVLPEFLQEMGFRMDHEFVARGHLFRKGVMKVAV 145
Fly 151 SKLIKIVPGKQQDMANEPISQSYIVELSVVAPTGQENVGEEMRVFAEQLKPLVQLEKIDYKRL 213
.|:.:::.....:.| ||:|.||:||||.|||.||:|:.:|:|.|||||:|||||||||.|||
Frog 146 YKVFRVLVAGAAEGA-EPLSLSYLVELSAVAPAGQDNIADEVRGFAEQLRPLVQLEKIDPKRL 207
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| MED18 | NP_569948.3 |
Med18 |
24..213 |
CDD:286687 |
103/190 (54%) |
| med18 | NP_001017086.1 |
Med18 |
19..207 |
CDD:370594 |
103/191 (54%) |
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
1 |
1.000 |
137 |
1.000 |
Domainoid score |
I4872 |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
1 |
1.000 |
- |
- |
|
|
| Homologene |
1 |
1.000 |
- |
- |
|
H9756 |
| Inparanoid |
1 |
1.050 |
193 |
1.000 |
Inparanoid score |
I3733 |
| OMA |
1 |
1.010 |
- |
- |
|
QHG48991 |
| OrthoDB |
1 |
1.010 |
- |
- |
|
D1140930at2759 |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0007504 |
| OrthoInspector |
1 |
1.000 |
- |
- |
|
oto105502 |
| Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR13321 |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R6162 |
| SonicParanoid |
1 |
1.000 |
- |
- |
|
X6389 |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
12 | 12.110 |
|
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