powered by:
Protein Alignment MED18 and sep11
DIOPT Version :9
Sequence 1: | NP_569948.3 |
Gene: | MED18 / 31140 |
FlyBaseID: | FBgn0026873 |
Length: | 217 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_593364.1 |
Gene: | sep11 / 2541925 |
PomBaseID: | SPAC5D6.05 |
Length: | 207 |
Species: | Schizosaccharomyces pombe |
Alignment Length: | 129 |
Identity: | 28/129 - (21%) |
Similarity: | 53/129 - (41%) |
Gaps: | 16/129 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 39 LMHRLKGLCDNVDTSPEPFHDLEVCMSLRQPNANQPLLLRVRRALGRDAPFQMRYLGNPEVDLRR 103
:::|.|.:..|:...|:.: |.:|.::...:... ....::..:.|...||.|.....
pombe 37 VVYRPKDVPPNLPRQPDSW--LRLCSNIESHDETD-------TEWSKNTQWSMYLEGNSEPKRED 92
Fly 104 PTLVRSCMDCACTNG-ILEFLTEMGFRLEFEYIAKG--YMFRKGRMKITVSKLIKIVPGKQQDM 164
...:|.......||| :.||:.:||:....|||.:| |.| ...||.....::|.:|:.:
pombe 93 KCGIRPVNRAKLTNGSVTEFVEKMGYEFSHEYIIQGLEYFF----FDTTVRIYQTLIPSQQRSI 152
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
MED18 | NP_569948.3 |
Med18 |
24..213 |
CDD:286687 |
28/129 (22%) |
sep11 | NP_593364.1 |
Med18 |
2..203 |
CDD:312963 |
28/129 (22%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR13321 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
Return to query results.
Submit another query.