DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED18 and mdt-18

DIOPT Version :10

Sequence 1:NP_569948.3 Gene:MED18 / 31140 FlyBaseID:FBgn0026873 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_491869.1 Gene:mdt-18 / 183844 WormBaseID:WBGene00007018 Length:232 Species:Caenorhabditis elegans


Alignment Length:212 Identity:67/212 - (31%)
Similarity:105/212 - (49%) Gaps:14/212 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RESLSHAMNNRFLPNLEYLLQGSILDSAVEHLMHRLKGLCDNVDTSPEPFHDLEVCMSLRQP--- 69
            :|.||  :|:......|.:|.|||....|..|..||.|||   |...|.|.:.|:..|||..   
 Worm    13 QEKLS--VNSTPYQTQECVLYGSIFAKNVPDLERRLAGLC---DPGCEEFFEHEMSFSLRSSGIM 72

  Fly    70 --NANQPLLLRVRRALGRDAPFQMRYLGNPEVDLRRPTLVR-SCMDCACTNGILEFLTEMGFRLE 131
              ..:..|..|.|........:|::|:|.||.|.:.||:|| .......:..::.:...:|.|::
 Worm    73 DIKTDIKLRRRFRTEHRIQNYWQLKYIGVPEPDQKCPTIVRKEISSLVHSQDMMTYAKSLGLRMD 137

  Fly   132 FEYIAKGYMFRKGRMKITVSKLIKIV-PGKQQDMANEPISQSYIVELSVVAPTGQENV--GEEMR 193
            :||:.:|.::.||.:||..|.|.... .|.....:.:.:|.|.:||:|:..|...|.:  .:.:|
 Worm   138 YEYMTQGKLWTKGNIKILHSILTSTSRAGTYDSNSIKSVSDSALVEISISLPESAEYMPAAKSLR 202

  Fly   194 VFAEQLKPLVQLEKIDY 210
            .||:||.|||.:||:||
 Worm   203 DFADQLMPLVNMEKVDY 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED18NP_569948.3 Med18 24..209 CDD:462845 61/193 (32%)
mdt-18NP_491869.1 Med18 26..218 CDD:462845 61/194 (31%)

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