DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gcna and ROS3

DIOPT Version :10

Sequence 1:NP_569947.2 Gene:Gcna / 31139 FlyBaseID:FBgn0023515 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_200621.1 Gene:ROS3 / 835925 AraportID:AT5G58130 Length:748 Species:Arabidopsis thaliana


Alignment Length:623 Identity:120/623 - (19%)
Similarity:210/623 - (33%) Gaps:202/623 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NAVDPSKVKVPFNQKFANLTLSSHKKRLQVSHAPKDH----PEKRNDQKTRKLPAAPMRANVGAP 70
            |...|||     |::..:|..:..::..|.....|..    |:|.:|:.:|              
plant   264 NLTHPSK-----NRQTISLEETGRQESSQAIRGKKKPSEVVPDKSSDEPSR-------------- 309

  Fly    71 APSCGANTEDTE--LDNSDYMEA---LQLSADGCSQD------VANVGDVELLS--------AGI 116
                   |:|.|  :||..:.:.   ..|.|:|.|.|      :..||..:.:.        ||:
plant   310 -------TKDLEQSIDNISWSQKSSWKSLMANGNSNDFSVSSFLPGVGSSKAVQPAPRNTDLAGL 367

  Fly   117 ---SNLKVQP---------INEEHSAKPEISICISSTTEENVSGDD-DAASCITISDSSEDEQEP 168
               .|||.:.         :.|:.....:|....|.|..:::..|| ||....|..:|..|:.. 
plant   368 PSRENLKKKTKRKRVTSTIMAEDLPVSDDIKRDDSDTMADDIERDDSDAVEYYTACESMADDTA- 431

  Fly   169 LPPDSMAVSEREIVANPGQEDIPQPMLTTEKVQRIEAFLRDVSIERREMEWNGPLTPPPLSSSQR 233
                |.:|:||:  .:...||                   |.:|:        .:...|.|.|..
plant   432 ----SDSVAERD--DSDAVED-------------------DTAID--------SMADDPASDSVA 463

  Fly   234 QSRLADADTESMSPTDEDWQPPTTRPIYNSTQLANNDTQVNTICSADATRLDSSKRLADDETEAN 298
            :|...||                          ..|||.::::.               |:|.:|
plant   464 ESDDGDA--------------------------VENDTAIDSMA---------------DDTVSN 487

  Fly   299 TLGSEELEPTYSSKRLADNDTEPNTLCSDSSETHNSTIHNNEPVPDESIEIPETSSEGELTPQKA 363
            ::...:      .....::||..:::|.|::        |::...|:|..:.:|.|:..:.....
plant   488 SMAESD------DGDNVEDDTAIDSMCDDTA--------NDDVGSDDSGSLADTVSDTSVEAVPL 538

  Fly   364 SSGSSTSGGDEHGSIQVSS-INISAKINI-KISIPTMESSSAEDDDEHYSSP--RATKSLPSSEE 424
            ...::|.|....|...|.. .|::..:|. |.|:...|  :..|::|....|  .:.||...|..
plant   539 EFVANTEGDSVDGKSNVEKHENVAEDLNAEKESLVVKE--NVVDEEEAGKGPLKASNKSTGGSSW 601

  Fly   425 VQHQEHQQ----QDPQSHQKSMLSVDDASEDEQFLTHAEKLLNQLYGKSWQTPDVIRTLKRSSGS 485
            :|.....|    ::..|...:.|..|..|:..:.......:.|| :..|.||...::....:|.|
plant   602 LQKASWTQLVSDKNTSSFSITQLFPDLTSDKGEAAGVINNVGNQ-FSNSNQTASAMKQTDYASSS 665

  Fly   486 GG--------KQAPLRP----------RNIQATAVTTAKKK--KPKPDESVLGDFSIFTKPLRTN 530
            ||        ...|:|.          :|:...|...||||  |.|...   ||...|.:     
plant   666 GGFVAAGVPVDSTPVRSLDENRQRLNGKNVSEGAKLGAKKKIIKRKVGS---GDTCTFMR----- 722

  Fly   531 QTPLNSTRLPPMRAVQTERRPRTQKPLTRPRTNHIDED 568
                :||.|        :...:.:|.|:.||.....|:
plant   723 ----SSTSL--------KEWAKAKKALSEPRRKKNSEE 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GcnaNP_569947.2 SprT 821..973 CDD:214794
ROS3NP_200621.1 PLN03213 1..748 CDD:178752 119/621 (19%)
Blue background indicates that the domain is not in the aligned region.

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