DRSC/TRiP Functional Genomics Resources

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Protein Alignment prage and REX4

DIOPT Version :10

Sequence 1:NP_001188528.1 Gene:prage / 31136 FlyBaseID:FBgn0283741 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_014561.1 Gene:REX4 / 854075 SGDID:S000005440 Length:289 Species:Saccharomyces cerevisiae


Alignment Length:167 Identity:56/167 - (33%)
Similarity:87/167 - (52%) Gaps:35/167 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   687 ALDCEMSYTGRGLD-----VTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSGAKS 746
            |:|||  :.|.|.:     :.::|:|...|.:|.:.||:|...::::.|..||| :.:....|.:
Yeast   123 AMDCE--FVGVGPEGKESALARISIVNYFGHVVLDEFVKPREKVVEWRTWVSGI-KPEHMKNAIT 184

  Fly   747 LAEVQR---DLLQLITADTILIGHGLENDLRALRLVH--NTLIDTSISFPHCNGFPYRR------ 800
            ..|.|:   |:|:    ..||:||.|::||.||.|.|  :.|.|||      ...|:|:      
Yeast   185 FKEAQKKTADILE----GRILVGHALKHDLEALMLSHPKSLLRDTS------RHLPFRKLYAKGK 239

  Fly   801 --ALRHLTKVHLKRDIQAGDGTTGHSSFEDSRACMEL 835
              :|:.||:..||..||.|:    |||.||:||.|.|
Yeast   240 TPSLKKLTREVLKISIQEGE----HSSVEDARATMLL 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prageNP_001188528.1 PH-like <614..650 CDD:473070
REX1_like 686..837 CDD:99848 56/167 (34%)
REX4NP_014561.1 REX4_like 122..274 CDD:99847 56/167 (34%)
Blue background indicates that the domain is not in the aligned region.

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