DRSC/TRiP Functional Genomics Resources

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Protein Alignment prage and AT5G40310

DIOPT Version :10

Sequence 1:NP_001188528.1 Gene:prage / 31136 FlyBaseID:FBgn0283741 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001330756.1 Gene:AT5G40310 / 834029 AraportID:AT5G40310 Length:357 Species:Arabidopsis thaliana


Alignment Length:306 Identity:72/306 - (23%)
Similarity:116/306 - (37%) Gaps:78/306 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 SLSKPCARCKRHFLVDELTGQYLTHEECQYHS---------GKYQRYYDGVSH------GRWTCC 638
            :|...|..|.|.|...|   ..:.|....|||         .|:.|.:|.:..      .:..|.
plant    12 TLRNKCGGCYRQFNKKE---HLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPKQECK 73

  Fly   639 NEGEESSPGC--CL------------GDR----HVWSGSVVGV------NGPYYDFVRTEHRGSG 679
            |  ..|..||  ||            .:|    :|.||.::.:      |....|:..:.     
plant    74 N--IFSIRGCRFCLTILESPNARRIHQERCQLSNVTSGLMIRMAALGLRNNSTIDYTSSR----- 131

  Fly   680 EDEPAVYALDCEMSYTGRGLD-----VTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETD 739
              .|.|.||.|:|  .|.|.|     ..:|.:...:..:|:..:|:|...:.:|..:.:||...:
plant   132 --SPRVVALSCKM--VGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPEN 192

  Fly   740 LCSGAKSLAEVQRDLLQLIT-------------ADTILIGHGLENDLRALRLVHNT--LIDTSIS 789
            | ..|..|...||.:.:.:.             ...||:||||:|.|.:|:|.:::  :.||:..
plant   193 L-RDAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIRDTAEY 256

  Fly   790 FPHCNGFPYRRALRHLTKVHLKRDIQAGDGTTGHSSFEDSRACMEL 835
            .|.........:|::||:.:|..||..|.    ...:||..|.|.|
plant   257 PPLMKSSKLSNSLKYLTQAYLGYDIHVGI----QDPYEDCVATMRL 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prageNP_001188528.1 PH-like <614..650 CDD:473070 11/52 (21%)
REX1_like 686..837 CDD:99848 44/170 (26%)
AT5G40310NP_001330756.1 C2H2 Zn finger 17..39 CDD:275371 6/24 (25%)
C2H2 Zn finger 46..63 CDD:275371 3/16 (19%)
REX4_like 136..300 CDD:99847 44/170 (26%)

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