DRSC/TRiP Functional Genomics Resources

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Protein Alignment prage and REXO1

DIOPT Version :9

Sequence 1:NP_001188528.1 Gene:prage / 31136 FlyBaseID:FBgn0283741 Length:852 Species:Drosophila melanogaster
Sequence 2:XP_011526446.1 Gene:REXO1 / 57455 HGNCID:24616 Length:1382 Species:Homo sapiens


Alignment Length:649 Identity:172/649 - (26%)
Similarity:269/649 - (41%) Gaps:130/649 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 SSDATSEDIDSSSELP---NKSKGNSCAGSIHASGGSKSRSKRHQKQSGQQTRNPDHNGQRTGAA 316
            |:...:||....:..|   .||:....:|......|.|.|.. |..:.||:...|     |.|.|
Human   623 STSVKTEDRGRLARQPPKEEKSEEKGLSGLTTLFPGQKRRIS-HLSKQGQEVEPP-----RRGPA 681

  Fly   317 TPCTGQKAKQGNAKWRQQQPNPSSNNQQQQMQQQMQQQKRGRNKKPGKWSNNIIDNPNSNHGGSS 381
            .|.......|.....|.||...:|.:..|...:..::........||: ...|...||..     
Human   682 VPPARPPTAQEVCYLRAQQAQRASASLLQAPARLAEKSPSVHISAPGE-KRRIAHIPNPR----- 740

  Fly   382 QQKTCDSSSSSALSSPTSSATTSATSSPTNSPTSYPRANGNRKRIEAALEWRREQELGRQNANFL 446
                       ..::||.:..|.|.|...:|  :.|...|.:      |:.|....:..:....:
Human   741 -----------LAAAPTGAKRTLAASGSQSS--NGPEPGGQQ------LKTRTLSGMASKTTTTI 786

  Fly   447 VPPLRQYEQLEFDDKTVVQQLRRHIIDNHLLRVYGFPVDSVVHEGAIEIF--KCMP-----HMSF 504
            :|.       .......:|.|::.||.    :.:|..|.:|:.:..:.:|  :|:.     ..:.
Human   787 IPK-------RIAHSPSLQSLKKPIIP----KEFGGKVPTVIRQRYLNLFIEECLKFCTSNQEAI 840

  Fly   505 AAALAETAQAV-----------TVINYHDGLTNRAEEEVANSTDSGNSSPQSLDSESGGEWSGSE 558
            ..||.|...|.           ..:|....|...|...|...:.:......|.:...||..:...
Human   841 EKALNEEKVAYDRSPSKNIYLNVAVNTLKKLRGLAPSAVPGLSKTSGRRVVSHEVVLGGRLAAKT 905

  Fly   559 CESSNSSSSSAGEAALGLEL----------------------------------------KYCHF 583
            ..|.:..||...|...|..|                                        |.|..
Human   906 SFSLSRPSSPRVEDLKGAALYSRLREYLLTQDQLKENGYPFPHPERPGGAIIFTAEEKRPKDCES 970

  Fly   584 VPVERSLS-KPCARCKRHFLVDELTGQYLTHEECQYHSGKYQRYYDGVSHG---RWTCCNEGEES 644
            :..:...| :.|.||...:||.. :|:.:..|||.||.|:.:|  :.|:.|   ::.||: ....
Human   971 LACDGLASCRTCCRCGTEYLVSS-SGRCIRDEECYYHWGRLRR--NRVAGGWETQYMCCS-AAAG 1031

  Fly   645 SPGCCLGDRHVWSGSVVGVNGPYYDFVRT-EHRGSGEDEPAVYALDCEMSYTGRGLDVTKVSLVA 708
            |.||.:..:||..|....:.|    ||:| |...||:..|.:||||||||||..||::|:|::|.
Human  1032 SVGCQVAKQHVQDGRKERLEG----FVKTFEKELSGDTHPGIYALDCEMSYTTYGLELTRVTVVD 1092

  Fly   709 LNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSGAKSLAEVQRDLLQLITADTILIGHGLENDL 773
            .:..:||:.||:|..:|:||||::||:||.||...:.:|.:||..||.:.:||||||||.||:||
Human  1093 TDVHVVYDTFVKPDNEIVDYNTRFSGVTEADLADTSVTLRDVQAVLLSMFSADTILIGHSLESDL 1157

  Fly   774 RALRLVHNTLIDTSISFPHCNGFPYRRALRHLTKVHLKRDIQ--------------AGDGTTGH 823
            .||:::|:|::|||:.|||..|.||:|:||:|...:|::.||              ||.|.:.|
Human  1158 LALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNGECRCLPWGRPCAGAGCSPH 1221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prageNP_001188528.1 PH-like <614..650 CDD:302622 14/38 (37%)
DnaQ 675..>837 CDD:223916 75/163 (46%)
REX1_like 686..837 CDD:99848 72/152 (47%)
REXO1XP_011526446.1 EloA-BP1 802..962 CDD:292495 24/163 (15%)
REX1_like 1070..1203 CDD:99848 68/132 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0847
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002085
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103246
Panther 1 1.100 - - O PTHR12801
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2254
SonicParanoid 1 1.000 - - X1541
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.840

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