DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prage and Aen

DIOPT Version :9

Sequence 1:NP_001188528.1 Gene:prage / 31136 FlyBaseID:FBgn0283741 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001101957.1 Gene:Aen / 361594 RGDID:1305051 Length:332 Species:Rattus norvegicus


Alignment Length:290 Identity:86/290 - (29%)
Similarity:130/290 - (44%) Gaps:73/290 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   584 VPVERSL----SKPCARCKRHFLVDELTGQYLTHEECQYHSGKYQRYYDGVSHGRWTCCNEGEES 644
            || |.||    :|..|| :||                :..|.::||:.     .|.....|.|..
  Rat     6 VP-ESSLTSLKTKDVAR-RRH----------------KRRSRQHQRFM-----ARKALLQEQESL 47

  Fly   645 S----PGCC--------------LGDRHVWSGSVVGVNG-----PYYDFVRTEHRGSGEDEPAVY 686
            |    ||.|              .|:|...:.:..|..|     |    |..|...||   |:.|
  Rat    48 SMVPGPGLCPLPSPTQTPAGTEASGNRKQRTKARSGSKGLCSKRP----VPREAPSSG---PSKY 105

  Fly   687 -ALDCEMSYT---GRGLDVTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSGAKSL 747
             |:||||..|   ||..::.:.|:|:.:|.::|:.::||...|:||.|::||||...: ..|...
  Rat   106 VAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHM-HKAIPF 169

  Fly   748 AEVQRDLLQLITADTILIGHGLENDLRALRLVH--NTLIDTSISFPHCNGFP-----YRRALRHL 805
            ...|:::|:|:.. .:::||.|.||.:||:.||  :.:.||:. .|:....|     .|.:|:.|
  Rat   170 QVAQKEILKLLKG-KVVVGHALHNDFQALKYVHPGSQIRDTTY-VPNLLSQPSSLTRARVSLKDL 232

  Fly   806 TKVHLKRDIQAGDGTTGHSSFEDSRACMEL 835
            ....|.:.||.|.  .||||.||:...|||
  Rat   233 ALNLLHKKIQVGH--HGHSSVEDAMTAMEL 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prageNP_001188528.1 PH-like <614..650 CDD:302622 10/53 (19%)
DnaQ 675..>837 CDD:223916 59/172 (34%)
REX1_like 686..837 CDD:99848 56/161 (35%)
AenNP_001101957.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..102 29/125 (23%)
Nucleolar localization signal. /evidence=ECO:0000250|UniProtKB:Q8WTP8 21..29 3/24 (13%)
DnaQ 102..>263 CDD:223916 57/164 (35%)
DnaQ_like_exo 106..262 CDD:299142 55/160 (34%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:Q8WTP8 160..183 4/24 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 272..332
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348817
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0847
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.