DRSC/TRiP Functional Genomics Resources

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Protein Alignment prage and pqe-1

DIOPT Version :9

Sequence 1:NP_001188528.1 Gene:prage / 31136 FlyBaseID:FBgn0283741 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_498135.2 Gene:pqe-1 / 175731 WormBaseID:WBGene00004095 Length:1647 Species:Caenorhabditis elegans


Alignment Length:876 Identity:195/876 - (22%)
Similarity:325/876 - (37%) Gaps:209/876 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DPEQQQQRKQHRSNILGCNKSSSINCSSINGDNRHLQRQ--QGKMYYNSSSRPFWRKCRSAAPTN 88
            |.:...:|:..|.     .:|.|.:..|....:|...|.  .|.....|:|....||.|...|.|
 Worm   901 DEDDMIERRSSRK-----RRSDSRSKKSATPTDRRRSRDTPTGSRSMRSTSPNDRRKSRETPPGN 960

  Fly    89 --LMTTIPTNNDLCNTAAAATYDKMQSCNKNSSSRITTTNNNVTTTSNISGNSSNKRCPQKYTGN 151
              :..|.|::                    ...||.|.|.::..::|.:|....:|..|..|.  
 Worm   961 RSMRRTSPSD--------------------GRKSRDTPTASSSMSSSTLSYCKKSKETPMSYE-- 1003

  Fly   152 TLAVNSNMLAYQQQATAGGKNSTRKSRHNNNKQNHQQQQQQQQQQFDHIHKRNGTAGGTGSECSP 216
                     ..:||..|..:.:.:....|..::...|.::.:..:...:.:   |...|.....|
 Worm  1004 ---------EIEQQKKAKRQRNCKTREENRERKRLAQLEELESSETTGVRR---TLRSTQDNSDP 1056

  Fly   217 A-APTSNWLQRGYGRQFVHSSCIEDKLLGHHNPGHRNSTSSDATSEDIDSSSELPNKSKGNSCAG 280
            . |..:..::.....:...:...|::......|.::..||| |:.:..|....:|.|...     
 Worm  1057 LDASLATTIEEFRKTKKKDAKSSENRAKEKQKPMNKRPTSS-ASVDSNDDGVHIPAKRMA----- 1115

  Fly   281 SIHASG-GSKSRSKRHQKQSGQQTRNPDHNGQRTGAATPCTGQKAKQGNAKWRQQQPNPSSNNQQ 344
              |||. ...||||  ....|.....|:|        |....::.|:...|.|:.:         
 Worm  1116 --HASSVPGPSRSK--PPMIGAVKNRPNH--------TEMLDKRNKESEEKRRKDR--------- 1159

  Fly   345 QQMQQQMQQQKRGRNKKPGKWSNNIIDNPNSNHGGSSQQKTCDSSSSSALSSPTSSATTSAT--S 407
                   .:.:|.||||               | .:.::|...:...:||.....:|...||  .
 Worm  1160 -------DELERLRNKK---------------H-TTEEEKIKMARLQNALKVVGKAAGLKATVKK 1201

  Fly   408 SPTNSPTSYPRANGNRKRIEAALEWRREQELG------RQNANFLV--------PPLRQYEQLEF 458
            ..|.||       ..:::...|:....:..:|      ||.|..||        .|....|..||
 Worm  1202 ELTGSP-------AKKQKPAPAVPKILDFSVGRTFTAIRQTAIKLVFDTFLERDSPNAAREAQEF 1259

  Fly   459 DDKTVVQQLRRHIIDNHLLRV-YGFPVDSVVHE---GAIEIFK-CMPHMSFAA-------ALAET 511
            :     ..:.:...|....|: .|..|.::..|   |.:|:.| .:.|....|       .:|..
 Worm  1260 E-----LSIAKQYTDGQKYRINIGHKVAALRKENTSGILEVNKNAVSHDKILAGGPKDNCTVARG 1319

  Fly   512 AQA------VTVINYHDGLTNRAEEEVANSTDSGNSSPQSLDSESGGEWSGSECESSNSSSSSAG 570
            .:.      :::...|..|   .:.::..|....|:.|...|        ||....|.:.:....
 Worm  1320 RKTHVDHRQLSIEKLHPLL---LQFKLTTSELETNAYPMRRD--------GSTKAVSIADTVYTQ 1373

  Fly   571 EAALGLELKYCHFVPVERSLSKPCARCKRHFLVDELTGQYLTHEECQYH------SGKYQRYYDG 629
            ...:.|:         :..:|:.|:||.:.|.:........:...|:||      :||...:   
 Worm  1374 NKKMFLD---------DYDMSRNCSRCNKEFKLSPNGTMIRSTGICRYHNRGVAINGKRDTF--- 1426

  Fly   630 VSHGRWTCCNEGEESSPGCCLGDRHVWS-------GSVVGVNGPYYDFVRTEHRGSGEDEPAVYA 687
              ..|::||||....:.||...|.||..       .:.|....|    |..:.|.:     .|||
 Worm  1427 --RKRYSCCNEEFNVALGCKFSDVHVTDQLFKKELSTFVSTPVP----VPNDQRST-----RVYA 1480

  Fly   688 LDCEMSYTGRGLDVTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSGAKSLAEVQR 752
            |||||.||..|..:.::::|.:....|.:.||:|..|::|.||::||:|...:.|...:|....:
 Worm  1481 LDCEMVYTIAGPALARLTMVDMQRNRVLDVFVKPPTDVLDPNTEFSGLTMEQINSAPDTLKTCHQ 1545

  Fly   753 DLLQLITADTILIGHGLENDLRALRLVHNTLIDTSISFPHCNGFPYRRALRHLTKVHLK------ 811
            .|.:.:.||||||||.||:||:|:|:||..:|||:|.|         |:.|. |||.||      
 Worm  1546 KLFKYVNADTILIGHSLESDLKAMRVVHKNVIDTAILF---------RSTRD-TKVALKVLSAKL 1600

  Fly   812 --RDIQAGDG--TTGHSSFEDSRACMELMLW 838
              ::|| ||.  ..||.|.||:..|::|:.:
 Worm  1601 LHKNIQ-GDNEDAIGHDSMEDALTCVDLIFY 1630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prageNP_001188528.1 PH-like <614..650 CDD:302622 12/41 (29%)
DnaQ 675..>837 CDD:223916 66/171 (39%)
REX1_like 686..837 CDD:99848 64/160 (40%)
pqe-1NP_498135.2 PHA03160 <285..405 CDD:165431
Amelogenin <377..502 CDD:197891
EloA-BP1 1230..1364 CDD:292495 28/149 (19%)
REX1_like 1479..1629 CDD:99848 64/160 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166931
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D774159at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4760
orthoMCL 1 0.900 - - OOG6_103246
Panther 1 1.100 - - O PTHR12801
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2254
SonicParanoid 1 1.000 - - X1541
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.880

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