DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prage and isg20

DIOPT Version :10

Sequence 1:NP_001188528.1 Gene:prage / 31136 FlyBaseID:FBgn0283741 Length:852 Species:Drosophila melanogaster
Sequence 2:XP_003201484.2 Gene:isg20 / 100534720 ZFINID:ZDB-GENE-100422-17 Length:338 Species:Danio rerio


Alignment Length:296 Identity:70/296 - (23%)
Similarity:113/296 - (38%) Gaps:92/296 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   557 SECESSNSSSSSAGEAALGLELKYCHFVPVERSLSKPCARCKRHFLVDELTGQYLTHEECQYHSG 621
            :||..:.|:|....|.:..::.|            :|           .||...|..|..:..||
Zfish    70 TECIKNGSTSDFVSEESNNMQFK------------RP-----------RLTHHTLPGESWEVDSG 111

  Fly   622 KYQRYYDGVSHGRWTCCNEGEESSPGCCLGDRHVWSGSVVGVNGPYYDFVRTEHRGSGEDEPAVY 686
                              ...||||            ...|.:.|   .:|.:|       ..:.
Zfish   112 ------------------FSSESSP------------PTSGRSSP---CLRIDH-------SRIV 136

  Fly   687 ALDCEMSYTGRG---LDVTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSGAKSLA 748
            |:||||..||.|   .:|.:.|:|...|.:||:.::.|...:.||.|::|||....| ..|....
Zfish   137 AMDCEMVGTGPGGRRSEVARCSIVDYYGNVVYDSYILPQDPVTDYRTRWSGIRSHHL-RQAVPFE 200

  Fly   749 EVQRDLLQLITADTILIGHGLENDLRAL------RLVHNT--------LIDTSISFPHCNGFPYR 799
            ..|.::|:::.. .|::||.|.:||..|      .::.:|        |.|.:   .:||     
Zfish   201 HAQNEILKILKG-KIIVGHALYHDLNVLYISVQPHMIRDTCSCVLLRQLYDVN---QNCN----- 256

  Fly   800 RALRHLTKVHLKRDIQAGDGTTGHSSFEDSRACMEL 835
            .:|:.|.:..|.|.||.  ...||.|.||:.:.::|
Zfish   257 ISLKKLAQKLLNRTIQV--DRQGHCSVEDALSALDL 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prageNP_001188528.1 PH-like <614..650 CDD:473070 7/35 (20%)
REX1_like 686..837 CDD:99848 49/167 (29%)
isg20XP_003201484.2 ISG20 136..292 CDD:99852 49/167 (29%)

Return to query results.
Submit another query.