DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adar and Strbp

DIOPT Version :10

Sequence 1:NP_001368969.1 Gene:Adar / 31130 FlyBaseID:FBgn0026086 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_063140781.1 Gene:Strbp / 84476 RGDID:620673 Length:715 Species:Rattus norvegicus


Alignment Length:305 Identity:93/305 - (30%)
Similarity:135/305 - (44%) Gaps:83/305 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SCHHAMRVARSSFGYQRQQFYAASSYAGKRSRFFVKRRFTFPSLPGNPVSAPSDINMNGYNRKLP 79
            |..||:|:  |:||    |.|..                    |..:|:  ||......|:..:.
  Rat   346 SAQHALRL--SAFG----QIYKV--------------------LEMDPL--PSSKPFQKYSWSVT 382

  Fly    80 QKRG---------YE--MPKYSDPKKKMCK--ERIPQPK-----NTVAMLNELRHGLIYKLESQT 126
            .|.|         :|  :....||.|||.:  .:|...|     |.:..||::|.||.|||.||:
  Rat   383 DKEGAGSSALKRPFEDGLGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQS 447

  Fly   127 GPVHAPLFTISVEVDGQKYLGQGRSKKVARIEAAATALRSFIQFKDGAVLSPLKPAG-------- 183
            ||||||:||:||:|||..|...|.|||.|::..|...|::...           |.|        
  Rat   448 GPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGY-----------PTGFDADIECM 501

  Fly   184 NLDFTSDEHLEND-------------VSKSAITVDGQKKVP-----DKGPVMLLYELFNDVNFEC 230
            :.|..||...:||             .::::.|::.:.:.|     .|.|||.|.|....:.:|.
  Rat   502 SSDEKSDNESKNDTVSSNSSNNTGNCTTETSSTLEVRTQGPILTASGKNPVMELNEKRRGLKYEL 566

  Fly   231 INIDGAQNNCRFKMTVTINEKKFDGTGPSKKTAKNAAAKAALASL 275
            |:..|..::.||.|.|.::.:||.|.||:||.||.:||.|||..|
  Rat   567 ISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAALAALEKL 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdarNP_001368969.1 DSRM_STRBP_RED-like_rpt1 105..167 CDD:380694 33/66 (50%)
DSRM_SF 213..>259 CDD:444671 17/45 (38%)
ADEAMc 306..677 CDD:214718
StrbpXP_063140781.1 None
Blue background indicates that the domain is not in the aligned region.

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