DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adar and Adat1

DIOPT Version :9

Sequence 1:NP_001368969.1 Gene:Adar / 31130 FlyBaseID:FBgn0026086 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001103081.1 Gene:Adat1 / 690810 RGDID:1591020 Length:497 Species:Rattus norvegicus


Alignment Length:503 Identity:123/503 - (24%)
Similarity:207/503 - (41%) Gaps:143/503 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 ADTIGRLVLEKFMEVIKGQEAYSRRK--VLAGIV--MTENMNFCEA---------KVISVSTGTK 359
            ||.|.:|....::::.|..:....|:  :||.:|  .|.....|:.         :|:|:.||||
  Rat     4 ADEIAQLCYAHYIKLPKQGKPEPNREWTLLAAVVKIQTPANQACDTPDKQIQVTKEVVSMGTGTK 68

  Fly   360 CVSGEHMSVNGAVLNDSHAEIVSRRCLLKYLYAQLDLQCNQATAYQSIFVRNTDGQYPYKLKSGV 424
            |:....|..:|.:|||||||:::||...:|:..||.:..  .....|||:..|. :..::|:..:
  Rat    69 CIGQSKMRESGDILNDSHAEVIARRSFQRYILHQLHVAA--VLKEDSIFLPGTQ-RGLWRLRPDL 130

  Fly   425 HFHLYINTAPCGDARIF--------------------SPHENDTGVDKHPNRKA----------- 458
            .|..:.:..|||||.|.                    ||.|....::...|:::           
  Rat   131 SFVFFSSHTPCGDASIIPKLEFEEQPCCPVIRNWANNSPGEGSETLEGSRNKRSCEGPDSPVAKK 195

  Fly   459 ------RGQLRTKI------ESGEGTIPVKSSDGI------------------------------ 481
                  .|.|...:      |||... |..||.|:                              
  Rat   196 KRLGTPAGSLSDCVAHHGAQESGPAK-PDASSSGLTKEELDAVNGTASGSFKVVDIYRTGAKCVP 259

  Fly   482 -QTWD-----------GVL-----QGQRLLTMSCSDKIARWNIVGIQGSLLSSIIE-PVYLHSIV 528
             :|.|           |:|     :|.|..:||||||:||||::|.||:||...:| |:||.::|
  Rat   260 GETGDLRKPGAAYHQVGLLRVKPGRGDRTCSMSCSDKMARWNVLGCQGALLMHFLEKPIYLSAVV 324

  Fly   529 LGSLLH-PEHMYRAVCGRIEKSIQGLPPPYHLNKPRLALVT-------SAEPRNQAKAP------ 579
            :|...: .|.|.||:.||.::::. ||..:.:.:.::...:       .|..|.:..:|      
  Rat   325 IGQCPYSQEAMRRALTGRCQETLV-LPRGFEVQELKIQQSSLLFEQSRCAVHRKRGDSPGRLVPC 388

  Fly   580 NFGINWT-IGDTELEVV-----NSLTGRTIGG--QVSRITKQAFFVKYGFLMANL------PGIL 630
            ...|:|: :....|:|.     ...|.:.||.  ..|||:|...|..:..|::.:      ..:.
  Rat   389 GAAISWSAVPQQPLDVTANGFPQGTTKKEIGSPRARSRISKVELFRSFQKLLSCIAEDERPDSVR 453

  Fly   631 VRKVTTDYGQTKANVKDYQIAKLELFSAFKR-EDLGSWLKKPIEQDEF 677
            |:|:.| |.:.|.....||    |.:||.:| :...||::.|....:|
  Rat   454 VQKLDT-YQEYKEAASAYQ----EAWSALRRVQPFSSWIRNPPNYHQF 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdarNP_001368969.1 DSRM_STRBP_RED-like_rpt1 105..167 CDD:380694
DSRM_SF 213..>259 CDD:412133
ADEAMc 306..677 CDD:214718 122/501 (24%)
Adat1NP_001103081.1 A_deamin 62..490 CDD:396626 109/437 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2777
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D274045at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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