DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adar and adad2

DIOPT Version :9

Sequence 1:NP_001368969.1 Gene:Adar / 31130 FlyBaseID:FBgn0026086 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_687183.1 Gene:adad2 / 558824 ZFINID:ZDB-GENE-130530-788 Length:517 Species:Danio rerio


Alignment Length:583 Identity:140/583 - (24%)
Similarity:222/583 - (38%) Gaps:148/583 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 KKVARIEAAATALRSFIQFKD------GAVLSPLKPAGNLDFTSDEHLENDVSKSA-------IT 203
            |::.|:  |||.:..|...::      .|.|.||.|...::   |.....:.|:|.       ..
Zfish    11 KRLPRM--AATLMMRFASEREPTFGIHRASLRPLTPNSEIE---DSRSAGEESQSTNPELHCLDD 70

  Fly   204 VDGQKKV---------PDKGPVMLLYELFNDVNFECINIDGAQNNCRFKMTVTINEKKFDGTGPS 259
            |:||..|         ||..|.|                                          
Zfish    71 VEGQSSVGHQTQEVQSPDSPPQM------------------------------------------ 93

  Fly   260 KKTAKNAAAKAALASLCNISYSPMVVPQKNVPLPID--------DKSSSMELPQIHADTIGRLVL 316
                ::..:.:.:.||...|.|.:..|:..|.|..|        |:.:.::....|.:.:..|..
Zfish    94 ----EDLGSSSDVTSLSGWSLSSVTAPEATVDLLEDATDGSLTRDQRTGVKFADWHKNRVTALCT 154

  Fly   317 EKFMEVIKG-QEAYSRRKVLAGIVMTENM-----NFCE-AKVISVSTGTKCVSGEHMSVNGAVLN 374
            .:|.::::. .|.:|.:...|..|:...:     ..|| .:|:::.:|..|.|| .:|..|:|::
Zfish   155 GRFDKLLRECPEYHSTKSCFAAFVLEREVRDTGGQRCENYEVVALGSGQSCCSG-WLSYTGSVVH 218

  Fly   375 DSHAEIVSRRCLLKYLYAQL------DLQCNQATAYQSIFVRNTDGQYPYKLKSGVHFHLYINTA 433
            |.||.:::||.|.:|||.||      |....|.:..:|:     ..:...:||..::.|||.|..
Zfish   219 DCHAIVIARRALKRYLYKQLLLFYSADPDMKQRSILESV-----PAERLLQLKPHIYLHLYTNKT 278

  Fly   434 PCGDARIFSPHENDTGVDKHPNRKARGQLRTKIESGEGTIP----VKSSDGIQTWDGVLQGQRLL 494
            |.|.|:.....:|          .|...|:.:..:....||    :.|     .|     |.|..
Zfish   279 PKGAAQCIVLSQN----------SAYSALKLQCHAKGSLIPAAFLLPS-----VW-----GARTC 323

  Fly   495 TMSCSDKIARWNIVGIQGSLLSSIIEPVYLHSIVLGSLLHPEHMYRAVCGRIEKSI-----QGLP 554
            .||.|.|:.||.:.|:||:|||..|.|||:.|.|||.   ..|....|...|.|.:     ..||
Zfish   324 CMSDSAKLTRWTVTGLQGALLSHFINPVYITSFVLGD---SRHCSEKVSEIINKRLGTGWTDALP 385

  Fly   555 PPYHLNKPRLALVTSAE----PRNQAKAPNFGINWTIGDTELEVVNSLTGRTIG--------GQV 607
            ||:   |.......|.|    ..|.....:..:||.:||:.:|:::|.||..|.        |..
Zfish   386 PPF---KQTSIFFLSGENVGPGENNEYCKDLSVNWCLGDSSIEILDSTTGYAINNSPFVSGPGSS 447

  Fly   608 SRITKQAFFVKYGFLMANLPGILVRKVTTDYGQTKANVKDYQIAKLELFSAFKREDLGSWLKK 670
            ||:.|:|.:..:..| |.|.|.......|.|...|...:.||..|.::...|...:.|.|..|
Zfish   448 SRLCKRALYFCFRKL-AGLAGHHELLSFTTYRSAKMAAQLYQETKTQVNMQFLTNNAGPWNSK 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdarNP_001368969.1 DSRM_STRBP_RED-like_rpt1 105..167 CDD:380694 5/14 (36%)
DSRM_SF 213..>259 CDD:412133 2/45 (4%)
ADEAMc 306..677 CDD:214718 109/399 (27%)
adad2XP_687183.1 A_deamin 198..509 CDD:280326 98/343 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D947117at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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