DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adar and adarb1b

DIOPT Version :10

Sequence 1:NP_001368969.1 Gene:Adar / 31130 FlyBaseID:FBgn0026086 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_021334693.1 Gene:adarb1b / 558759 ZFINID:ZDB-GENE-030219-15 Length:750 Species:Danio rerio


Alignment Length:669 Identity:303/669 - (45%)
Similarity:406/669 - (60%) Gaps:76/669 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GYNRKLPQKRGYEMPKYSD--PKKKMCKERIPQPKNTVAMLNELRHGLIYKLESQTGPVHAPLFT 135
            |..||.|.:.|.....:|.  |||:........|||.:..|||::.||.|||.|||||||||:|.
Zfish    94 GGGRKRPLEEGNNGHSHSKFRPKKRKKTPGPVLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFV 158

  Fly   136 ISVEVDGQKYLGQGRSKKVARIEAAATALRSFIQFKD--------GAVLSPLKPAGNLDFTSDEH 192
            ::|||:||.:.|.|.:||.|::.||..|||||:||.:        |..|:.     |.|||||:.
Zfish   159 MTVEVNGQLFEGSGPTKKKAKLNAAEKALRSFVQFPNASEAHLAMGRTLTV-----NTDFTSDQA 218

  Fly   193 LENDV--------------------SKSAITVDGQKKVPD------------------------K 213
            ...|:                    ...::...|:..||.                        |
Zfish   219 DFPDMLFNGFETPAPPEETFFLGSNGNGSLNPLGEYPVPQAAGTNSLVQAPLPPPSSFASSASGK 283

  Fly   214 GPVMLLYELFNDVNFECINIDGAQNNCRFKMTVTINEKKFDGTGPSKKTAKNAAAKAALASLCNI 278
            .|||:|.||...:.:|.::..|..:...|.|:||::.:.|:|:|.:||.||..||:|||:||.| 
Zfish   284 NPVMILNELRPGLKYEFVSESGESHAKNFVMSVTVDSQMFEGSGRNKKLAKARAAQAALSSLFN- 347

  Fly   279 SYSPMVVPQKNVPLPIDDKSSSMELPQIHADTIGRLVLEKFMEVIKG-QEAYSRRKVLAGIVMTE 342
                |.:.|.....||..:...:.|||:.||.:.|||::||.|:... ...::|||||||:|||.
Zfish   348 ----MQLDQTPSRQPIPREGLQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTT 408

  Fly   343 NMNFCEAKVISVSTGTKCVSGEHMSVNGAVLNDSHAEIVSRRCLLKYLYAQLD--LQCNQATAYQ 405
            ..:..:|:||.|||||||::||:||..|..|||.||||::||.|::|||.||:  |..|:....:
Zfish   409 GTDVKDAQVICVSTGTKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYMQLEHFLSNNKEEHQK 473

  Fly   406 SIFVRNTDGQYPYKLKSGVHFHLYINTAPCGDARIFSPHE---NDTGVDKHPNRKARGQLRTKIE 467
            |||::..  :..|:||..|.|||||:|:||||||||||||   .|.| |:|||||||||||||||
Zfish   474 SIFMQCE--KRGYRLKDSVQFHLYISTSPCGDARIFSPHEAGVEDQG-DRHPNRKARGQLRTKIE 535

  Fly   468 SGEGTIPVKSSDGIQTWDGVLQGQRLLTMSCSDKIARWNIVGIQGSLLSSIIEPVYLHSIVLGSL 532
            ||||||||:||:.||||||||||:|||||||||||||||:|||||||:|...||:|..||:||||
Zfish   536 SGEGTIPVRSSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFSEPIYFSSIILGSL 600

  Fly   533 LHPEHMYRAVCGRIEKSIQGLPPPYHLNKPRLALVTSAEPRNQAKAPNFGINWTIGDTELEVVNS 597
            .|.:|:.||:..|| ..|:.||..:.||:|.|:.:::||.|...|||||.:|||:||..|||:|:
Zfish   601 YHADHLSRAMYQRI-ADIEDLPQQFSLNRPLLSGISNAEARQPGKAPNFSVNWTVGDQALEVINA 664

  Fly   598 LTGRTIGGQVSRITKQAFFVKYGFLMANLPGILVRKV--TTDYGQTKANVKDYQIAKLELFSAFK 660
            .||:...|:.||:.|.|.:.::..|.:.|...|..||  .:.|.:.|....:|..||..|..||.
Zfish   665 TTGKDDMGRASRLCKHALYSRWVRLHSKLSPTLRIKVPKPSSYHEAKQAAVEYHTAKQTLIKAFH 729

  Fly   661 REDLGSWLKKPIEQDEFGL 679
            :..||:|:|||||||:|.|
Zfish   730 KAGLGAWVKKPIEQDQFSL 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdarNP_001368969.1 DSRM_STRBP_RED-like_rpt1 105..167 CDD:380694 35/61 (57%)
DSRM_SF 213..>259 CDD:444671 16/45 (36%)
ADEAMc 306..677 CDD:214718 205/378 (54%)
adarb1bXP_021334693.1 DSRM_RED1_rpt1 123..194 CDD:380724 39/70 (56%)
DSRM_RED1_rpt2 282..350 CDD:380727 29/72 (40%)
ADEAMc 371..747 CDD:214718 205/379 (54%)

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