DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adar and adarb1b

DIOPT Version :9

Sequence 1:NP_001368969.1 Gene:Adar / 31130 FlyBaseID:FBgn0026086 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_021334693.1 Gene:adarb1b / 558759 ZFINID:ZDB-GENE-030219-15 Length:750 Species:Danio rerio


Alignment Length:669 Identity:303/669 - (45%)
Similarity:406/669 - (60%) Gaps:76/669 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GYNRKLPQKRGYEMPKYSD--PKKKMCKERIPQPKNTVAMLNELRHGLIYKLESQTGPVHAPLFT 135
            |..||.|.:.|.....:|.  |||:........|||.:..|||::.||.|||.|||||||||:|.
Zfish    94 GGGRKRPLEEGNNGHSHSKFRPKKRKKTPGPVLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFV 158

  Fly   136 ISVEVDGQKYLGQGRSKKVARIEAAATALRSFIQFKD--------GAVLSPLKPAGNLDFTSDEH 192
            ::|||:||.:.|.|.:||.|::.||..|||||:||.:        |..|:.     |.|||||:.
Zfish   159 MTVEVNGQLFEGSGPTKKKAKLNAAEKALRSFVQFPNASEAHLAMGRTLTV-----NTDFTSDQA 218

  Fly   193 LENDV--------------------SKSAITVDGQKKVPD------------------------K 213
            ...|:                    ...::...|:..||.                        |
Zfish   219 DFPDMLFNGFETPAPPEETFFLGSNGNGSLNPLGEYPVPQAAGTNSLVQAPLPPPSSFASSASGK 283

  Fly   214 GPVMLLYELFNDVNFECINIDGAQNNCRFKMTVTINEKKFDGTGPSKKTAKNAAAKAALASLCNI 278
            .|||:|.||...:.:|.::..|..:...|.|:||::.:.|:|:|.:||.||..||:|||:||.| 
Zfish   284 NPVMILNELRPGLKYEFVSESGESHAKNFVMSVTVDSQMFEGSGRNKKLAKARAAQAALSSLFN- 347

  Fly   279 SYSPMVVPQKNVPLPIDDKSSSMELPQIHADTIGRLVLEKFMEVIKG-QEAYSRRKVLAGIVMTE 342
                |.:.|.....||..:...:.|||:.||.:.|||::||.|:... ...::|||||||:|||.
Zfish   348 ----MQLDQTPSRQPIPREGLQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTT 408

  Fly   343 NMNFCEAKVISVSTGTKCVSGEHMSVNGAVLNDSHAEIVSRRCLLKYLYAQLD--LQCNQATAYQ 405
            ..:..:|:||.|||||||::||:||..|..|||.||||::||.|::|||.||:  |..|:....:
Zfish   409 GTDVKDAQVICVSTGTKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYMQLEHFLSNNKEEHQK 473

  Fly   406 SIFVRNTDGQYPYKLKSGVHFHLYINTAPCGDARIFSPHE---NDTGVDKHPNRKARGQLRTKIE 467
            |||::..  :..|:||..|.|||||:|:||||||||||||   .|.| |:|||||||||||||||
Zfish   474 SIFMQCE--KRGYRLKDSVQFHLYISTSPCGDARIFSPHEAGVEDQG-DRHPNRKARGQLRTKIE 535

  Fly   468 SGEGTIPVKSSDGIQTWDGVLQGQRLLTMSCSDKIARWNIVGIQGSLLSSIIEPVYLHSIVLGSL 532
            ||||||||:||:.||||||||||:|||||||||||||||:|||||||:|...||:|..||:||||
Zfish   536 SGEGTIPVRSSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFSEPIYFSSIILGSL 600

  Fly   533 LHPEHMYRAVCGRIEKSIQGLPPPYHLNKPRLALVTSAEPRNQAKAPNFGINWTIGDTELEVVNS 597
            .|.:|:.||:..|| ..|:.||..:.||:|.|:.:::||.|...|||||.:|||:||..|||:|:
Zfish   601 YHADHLSRAMYQRI-ADIEDLPQQFSLNRPLLSGISNAEARQPGKAPNFSVNWTVGDQALEVINA 664

  Fly   598 LTGRTIGGQVSRITKQAFFVKYGFLMANLPGILVRKV--TTDYGQTKANVKDYQIAKLELFSAFK 660
            .||:...|:.||:.|.|.:.::..|.:.|...|..||  .:.|.:.|....:|..||..|..||.
Zfish   665 TTGKDDMGRASRLCKHALYSRWVRLHSKLSPTLRIKVPKPSSYHEAKQAAVEYHTAKQTLIKAFH 729

  Fly   661 REDLGSWLKKPIEQDEFGL 679
            :..||:|:|||||||:|.|
Zfish   730 KAGLGAWVKKPIEQDQFSL 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdarNP_001368969.1 DSRM_STRBP_RED-like_rpt1 105..167 CDD:380694 35/61 (57%)
DSRM_SF 213..>259 CDD:412133 16/45 (36%)
ADEAMc 306..677 CDD:214718 205/378 (54%)
adarb1bXP_021334693.1 DSRM 127..189 CDD:214634 35/61 (57%)
DSRM 284..>329 CDD:238007 15/44 (34%)
ADEAMc 371..747 CDD:214718 205/379 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 342 1.000 Domainoid score I1046
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8280
Inparanoid 1 1.050 515 1.000 Inparanoid score I1256
OMA 1 1.010 - - QHG48426
OrthoDB 1 1.010 - - D274045at33208
OrthoFinder 1 1.000 - - FOG0002274
OrthoInspector 1 1.000 - - otm26331
orthoMCL 1 0.900 - - OOG6_104480
Panther 1 1.100 - - LDO PTHR10910
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2305
SonicParanoid 1 1.000 - - X1704
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1313.010

Return to query results.
Submit another query.