DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adar and loqs

DIOPT Version :10

Sequence 1:NP_001368969.1 Gene:Adar / 31130 FlyBaseID:FBgn0026086 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_609646.1 Gene:loqs / 34751 FlyBaseID:FBgn0032515 Length:465 Species:Drosophila melanogaster


Alignment Length:313 Identity:76/313 - (24%)
Similarity:113/313 - (36%) Gaps:77/313 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 KNTVAMLNEL--RHGLI--YKLESQTGPVHAPLFTISVEVDGQ----KYLGQGRSKKVARIEAAA 161
            |..|::|.||  |.|:.  |:|....|.:|.|.|...|....:    ..:|.|||||    ||..
  Fly   134 KTPVSILQELLSRRGITPGYELVQIEGAIHEPTFRFRVSFKDKDTPFTAMGAGRSKK----EAKH 194

  Fly   162 TALRSFIQFKDGAVL--SPLKPAGNLDFTSDEHLENDVSKSAITV-----DGQKKVPDKG----- 214
            .|.|:.|....||.|  ||...||             .|.:.:||     ||.......|     
  Fly   195 AAARALIDKLIGAQLPESPSSSAG-------------PSVTGLTVAGSGGDGNANATGGGDASDK 246

  Fly   215 ----PVMLLYEL-----FNDVNFECINIDGAQNNCRFKMTVTINEKKFDGTGPSKKTAKNAAAKA 270
                |:..|.|:     :...::|.....|..:...|.:..:|...:..|.|.|||.||..||..
  Fly   247 TVGNPIGWLQEMCMQRRWPPPSYETETEVGLPHERLFTIACSILNYREMGKGKSKKIAKRLAAHR 311

  Fly   271 ALA--------------SLC-NISYSPMVVPQ-----KNVPLPIDDKSSSMELPQIH---ADTIG 312
            ...              |:| .:...|.....     |::.:|......|.::.|.|   .:..|
  Fly   312 MWMRLQETPIDSGKISDSICGELEGEPRSSENYYGELKDISVPTLTTQHSNKVSQFHKTLKNATG 376

  Fly   313 RLVLEKFMEVIKGQEA-YSRRKVLAGIVMTENMNFCEAKVISVSTGTKCVSGE 364
            :.:|:.....:|..:. |.:   |.|.:.|||    :.:|..|....|..||:
  Fly   377 KKLLKLQKTCLKNNKIDYIK---LLGEIATEN----QFEVTYVDIEEKTFSGQ 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdarNP_001368969.1 DSRM_STRBP_RED-like_rpt1 105..167 CDD:380694 24/69 (35%)
DSRM_SF 213..>259 CDD:444671 10/59 (17%)
ADEAMc 306..677 CDD:214718 15/63 (24%)
loqsNP_609646.1 DSRM_PRKRA-like_rpt1 134..206 CDD:380691 25/75 (33%)
DSRM_PRKRA-like_rpt2 250..316 CDD:380692 16/65 (25%)
DSRM_PRKRA-like_rpt3 393..463 CDD:380693 11/37 (30%)

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