DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scgdelta and sgcg

DIOPT Version :10

Sequence 1:NP_525039.1 Gene:Scgdelta / 31129 FlyBaseID:FBgn0025391 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_031752021.1 Gene:sgcg / 780370 XenbaseID:XB-GENE-956423 Length:313 Species:Xenopus tropicalis


Alignment Length:271 Identity:107/271 - (39%)
Similarity:169/271 - (62%) Gaps:12/271 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LGLIGWRKKCLYTLLLLLMLLIITNLVLTLWILKVMEFSTEGMGQLKIVPGGIQLSGQAIIMDML 198
            :|:.||||:|||..:|||:::::.|..||:||||||.||..|||.|::...|::|.|::..:..|
 Frog    43 IGIYGWRKRCLYLFVLLLLIILVVNFALTIWILKVMWFSPSGMGHLRVTSEGLRLEGESEFLYPL 107

  Fly   199 RASTIRSRHGQPISIESSRNFSINTRDPNGMIENHLFLGHDKFECLSAGFRINDTNGRSLFSVNR 263
            .|..|.||....:.:.||:|.::|.|:.:|.|...|.:|.:..|.....|:||..||:.||||:.
 Frog   108 YAKEIHSRVDDSLLLHSSQNITVNARNSDGHITGRLTVGPNAIETHGQQFQINSANGKMLFSVDE 172

  Fly   264 DEVTIGAHALRIDGEGGAVFRESVQTPHVRAEPGRELRLESPTRQLEMTAAKDINLQSRAGGIEV 328
            .||.:|...||:.|..||:|..||:||.|||:..::||||||||.|.:.|.|.::::::||.|||
 Frog   173 QEVLVGTDKLRVTGPQGALFEHSVETPLVRADSSKQLRLESPTRSLSIDAPKGVHIKAQAGNIEV 237

  Fly   329 VALEDVKFRALDGSLRLESSKILMPNLRTAQPPILGTAQSRDH---MHRVFQLCACSNGKLFLAA 390
            ::.:|:|.::.||.|.|::..:.:|.|....||    :.||.:   ...::::|.|.:|||:|:.
 Frog   238 LSQQDIKLQSSDGMLILDAETVRLPKLSLPIPP----SDSRRNSGGSQELYEICVCPDGKLYLSV 298

  Fly   391 PHSICAGDDST 401
                 ||..||
 Frog   299 -----AGYGST 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScgdeltaNP_525039.1 Sarcoglycan_1 135..393 CDD:461428 103/260 (40%)
sgcgXP_031752021.1 Sarcoglycan_1 43..302 CDD:461428 105/267 (39%)

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