DRSC/TRiP Functional Genomics Resources

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Protein Alignment b6 and Nptxr

DIOPT Version :10

Sequence 1:NP_477365.1 Gene:b6 / 31124 FlyBaseID:FBgn0024897 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_110468.2 Gene:Nptxr / 81005 RGDID:628898 Length:494 Species:Rattus norvegicus


Alignment Length:280 Identity:70/280 - (25%)
Similarity:94/280 - (33%) Gaps:100/280 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ASSSHEISTSFSQFGGDKETTEVEDEL--LLGRAAIVNGVDSSAAVSHPISFADHLEDQYESYSI 112
            |:.||         |..::..|||.||  |.||.|                   .||....:||.
  Rat   248 AALSH---------GSHQQRQEVEKELDALQGRVA-------------------ELEHGSSAYSP 284

  Fly   113 EDEAPKEPLAFPRSPVYGSDRCSVKKFAFNQDGEVEYGNPMPELDQFTICFWMRF-TNHSGDHVL 176
            .| |.|..:....:.:|...|.:|                 |||..||.|.|:|. :..||....
  Rat   285 PD-AFKVSIPIRNNYMYARVRKAV-----------------PELYAFTACMWLRSRSGGSGQGTP 331

  Fly   177 LTY------------EAGKEPREVQIWVANAQNSSFLSMAIKGQQMYRLNYPLKMRQWHHMCSSW 229
            .:|            |||.||.|:.|                ..::.:|...||...|||:|.:|
  Rat   332 FSYSVPGQANEIVLLEAGLEPMELLI----------------NDKVAQLPLSLKDSNWHHICIAW 380

  Fly   230 NGKTGEWQAWLKAERIGRGFHNSLVGHKIPANGKLRSGGSSVT------------GEVS------ 276
            ..:.|.|.|:...|..|.| .|....|.|..:|.|..|....|            |:::      
  Rat   381 TTRDGLWSAYQDGELRGSG-DNLAAWHPIKPHGILILGQEQDTLGGRFDATQAFVGDIAQFNLWD 444

  Fly   277 HGLHFEMTLVQVYRVALSAG 296
            |.|    |..||..:|...|
  Rat   445 HAL----TPAQVLGIANCTG 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
b6NP_477365.1 LamG 134..>264 CDD:473984 37/142 (26%)
NptxrNP_110468.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..80
Smc <106..>277 CDD:440809 14/56 (25%)
PTX 282..488 CDD:128463 55/218 (25%)
Blue background indicates that the domain is not in the aligned region.

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