DRSC/TRiP Functional Genomics Resources

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Protein Alignment b6 and apcs

DIOPT Version :10

Sequence 1:NP_477365.1 Gene:b6 / 31124 FlyBaseID:FBgn0024897 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001373237.1 Gene:apcs / 792467 ZFINID:ZDB-GENE-081107-34 Length:241 Species:Danio rerio


Alignment Length:189 Identity:39/189 - (20%)
Similarity:63/189 - (33%) Gaps:53/189 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 QFTICFWMRF--TNHSGDHVLLTYEAGKEPREVQI-WVANAQNSSFLSMAIKGQQMYRLNYPLKM 219
            :||:|  |||  ...|.:..|.:......|:::.: |.|..:....|   |....:.....|..:
Zfish    55 EFTVC--MRFYTDQESSNPCLFSLATPSNPQDISLSWSAETKKYQLL---IHNSPVQFKGLPFNL 114

  Fly   220 RQWHHMCSSWNGK-----------------TGEWQAWLKAERIGRGFHNSLVGHKIPANGKLRSG 267
            .||:.:|.:|:.|                 .|..||:..|..|..|...:.:|...|.:      
Zfish   115 NQWNTICVTWDVKNALAQMFVNEVASIKKVVGPKQAFKGAPVISLGQCQTQIGGSFPQS------ 173

  Fly   268 GSSVTGEVS----HGLHFEMTLVQVYRVALSA-----------------GKAHRDHKHH 305
             .:.||.:|    |........::.|..|.|.                 |.|..:.|||
Zfish   174 -KTFTGFISDVHMHNQVLTTNQIKTYMEAKSKYKLGDYISWHNLMYTIFGSAEINEKHH 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
b6NP_477365.1 LamG 134..>264 CDD:473984 27/125 (22%)
apcsNP_001373237.1 LamG 27..224 CDD:473984 35/180 (19%)

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